RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Mcur1Q9CXD6 340 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Tpd52l2Q9CYZ2 220 aaKnown RBP18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Myl7Q9QVP4 175 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Plekhg1F6S200 1446 aa18.46■□□□□ 0.55
Ubfd1-201ENSMUST00000033158 Ugt1a5B2RT14 529 aa18.46■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ints8Q80V86 995 aa18.46■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Lrp2bpQ9D4C6 346 aa18.46■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Gcc2Q8CHG3 1679 aa18.46■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ddx23D3Z0M9 819 aaKnown RBP18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Eya3P97480 510 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Arhgef1Q61210 920 aaKnown RBP18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rassf4Q8CB96 322 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ccdc28aQ8CEI3 192 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Lonp2Q9DBN5 852 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Zkscan5Q9Z1D8 819 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pard3Q99NH2 1333 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Akr1b8P45377 316 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Nlrx1Q3TL44 975 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Bicdl2Q8CHW5 507 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 JmyQ9QXM1 983 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rusc2Q80U22 1514 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Armc2Q3URY6 854 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 PaoxQ8C0L6 504 aa18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Acsl3Q9CZW4 720 aaKnown RBP18.45■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ap1b1O35643 943 aaKnown RBP18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Sept7O55131 436 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Krt8P11679 490 aaKnown RBP18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Kif24Q6NWW5 1356 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Speer2E9Q9U2 264 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Prpf38aQ4FK66 312 aaKnown RBP18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 DbnlQ62418 436 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ube3bQ9ES34 1070 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Tnip1Q9WUU8 647 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Dnajc21E9Q8D0 531 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pde11aP0C1Q2 933 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ccdc114Q3UX62 658 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 PsdQ5DTT2 1024 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Mpp4Q6P7F1 635 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pcdhb2Q91Y00 799 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Lmo7E9PYF4 1699 aaKnown RBP18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 1700113H08RikE9Q9Q5 327 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ranbp1P34022 203 aaKnown RBP18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 MaeaQ4VC33 396 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Psrc1Q9D0P7 329 aa18.44■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Vmn2r68L7N2B3 851 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rab3il1Q8VDV3 383 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Zscan18E9PUD6 809 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pkp1P97350 728 aaKnown RBP18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ccdc174Q3U155 467 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Fam228aQ8CDW1 299 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rrbp1Q99PL5 1605 aaKnown RBP18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Gm4340L7N2C4 268 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rbm12b2Q66JV4 834 aaKnown RBP18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 VmacQ8BP01 174 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Kif2bQ8C0N1 668 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pold4Q9CWP8 107 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 PigbQ9JJQ0 542 aa18.43■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pprc1Q6NZN1 1644 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Apol7aB2RT54 418 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 MarsQ68FL6 902 aaKnown RBP18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 RragaQ80X95 313 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ndufab1Q9CR21 156 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Kif21bQ9QXL1 1668 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 EmbP21995 330 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Il15P48346 162 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Mtus1Q5HZI1 1210 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Slc27a1Q60714 646 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Asap2Q7SIG6 958 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 SnrkQ8VDU5 748 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Serpinb12Q9D7P9 423 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 FliiQ9JJ28 1271 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pde8bE9Q4S1 865 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rps6ka1P18653 724 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Armcx3Q8BHS6 379 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Gucy1a3Q9ERL9 691 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Trpc3Q9QZC1 836 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Otud7bB2RUR8 840 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Cnnm4Q69ZF7 771 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Spata16Q8C636 571 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rsad2Q8CBB9 362 aa18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Fam208aQ69ZR9 1610 aaKnown RBP18.42■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Ttc41Q692V3 1318 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Olfr247E9PVJ7 320 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Olfr819K7N727 320 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Gbp7Q91Z40 638 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Gtf2iQ9ESZ8 998 aaKnown RBP18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Speer4f2E9Q366 295 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Nlrp5Q9R1M5 1163 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Cib2Q9Z309 187 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Tspyl1O88852 379 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Gigyf2Q6Y7W8 1291 aaKnown RBP18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Znf830Q8R1N0 363 aaKnown RBP18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 FibpQ9JI19 357 aa18.41■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Parp2O88554 559 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Apol10aQ8CCA5 318 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Psma7Q9Z2U0 248 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Sclt1G5E861 688 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Klhl7Q8BUL5 586 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Slc35g1Q8BY79 368 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Pak2Q8CIN4 524 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms