RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 Krt85Q9Z2T6 507 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Col20a1Q923P0 1320 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Lama2Q60675 3118 aaKnown RBP13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Lipo1J3QME6 396 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Pde4aO89084 844 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 CnpP16330 420 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Rc3h1Q4VGL6 1130 aaKnown RBP13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Eme2Q56A04 373 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Calhm4Q8CE93 315 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Nup133Q8R0G9 1155 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ndufv1Q91YT0 464 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Pla2g12bQ99P27 195 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Txnrd2Q9JLT4 524 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Megf6Q80V70 1572 aa13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Usp42B2RQC2 1324 aaKnown RBP13.58□□□□□ -0.24
Cln3-201ENSMUST00000032962 Nfatc2ipO09130 412 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Pde11aP0C1Q2 933 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Rnf20Q5DTM8 973 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Psen2Q61144 448 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ano6Q6P9J9 911 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Alx1Q8C8B0 326 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Borcs6Q9D6W8 360 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Irgm2A0A140LIF8 407 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 1700113H08RikE9Q9Q5 327 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Lnx1O70263 728 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 MycnP03966 462 aaKnown RBP13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Myl3P09542 204 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Esyt2Q3TZZ7 845 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Usp50Q6P8X6 390 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Trmt2aQ8BNV1 574 aaKnown RBP13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ccz1Q8C1Y8 480 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ccdc158Q8CDI6 1109 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Srgap1Q91Z69 1062 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ndfip2Q91ZP6 311 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Dnajc14Q921R4 703 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Aox3G3X982 1335 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Pnpla6Q3TRM4 1355 aa13.57□□□□□ -0.24
Cln3-201ENSMUST00000032962 Gm42715A0A087WP63 3095 aaKnown RBP13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Tsc2Q61037 1814 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Kansl3A2RSY1 903 aaKnown RBP13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Lmod3E9QA62 571 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 VrtnQ3SYK4 740 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Prpf38aQ4FK66 312 aaKnown RBP13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Znf219Q6IQX8 726 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Olfr118Q7TRJ6 321 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Tlcd1Q99JT6 247 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Bap1Q99PU7 728 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 ZwintQ9CQU5 252 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Sh3bgrQ9WUZ7 214 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 CpdO89001 1377 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ecm29Q6PDI5 1840 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ppp4cP97470 307 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ctdnep1Q3TP92 244 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ehmt1Q5DW34 1296 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Tbc1d9bQ5SVR0 1263 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Lman1lQ8VCD3 505 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Hdac9Q99N13 588 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Plagl1Q9JLQ4 704 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 Klrc1Q9Z202 244 aa13.56□□□□□ -0.24
Cln3-201ENSMUST00000032962 NynrinQ5DTZ0 1840 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Card6E9PWH2 1175 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ptpn12P35831 775 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Rnf180Q3U827 592 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ubash3aQ3V3E1 624 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Tsen34Q8BMZ5 316 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Mboat7Q8CHK3 473 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ppp1r11Q8K1L5 131 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 CerkQ8K4Q7 531 aa13.55□□□□□ -0.24
Cln3-201ENSMUST00000032962 RubcnlQ3TD16 648 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Zc3h15Q3TIV5 426 aaKnown RBP13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Zbtb39Q6PDK0 712 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 LdhdQ7TNG8 484 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ttll4Q80UG8 1193 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Bicd2Q921C5 820 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ubxn2aQ99KJ0 258 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 HibadhQ99L13 335 aaKnown RBP13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Myh2G3UW82 1942 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Tcof1O08784 1320 aaKnown RBP13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Aox4Q3TYQ9 1336 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Fam178bQ24JP3 464 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ano1Q8BHY3 960 aa13.54□□□□□ -0.24
Cln3-201ENSMUST00000032962 Cfap58B2RW38 873 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Nova2D3YVV7 556 aaKnown RBP13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Stat1P42225 749 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Npr3P70180 536 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Zfp317Q8C0Q5 607 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Tubb6Q922F4 447 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Zbtb43Q9DAI4 467 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Syt10Q9R0N4 523 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Znf638Q61464 1960 aaKnown RBP13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Zscan29E9Q5B4 869 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Gm29094F6Q785 221 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Arid4aF8VPQ2 1261 aaKnown RBP13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Gas1Q01721 343 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Lgr6Q3UVD5 967 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Ube2oQ6ZPJ3 1288 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Kbtbd13Q8C828 458 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Xrcc4Q924T3 326 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 CsadQ9DBE0 493 aa13.53□□□□□ -0.24
Cln3-201ENSMUST00000032962 Hmg20bQ9Z104 317 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms