RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Dynll1P63168 89 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 VrtnQ3SYK4 740 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Q3TYL0 343 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Strip1Q8C079 837 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ano2Q8CFW1 1002 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 AdnpQ9Z103 1108 aaKnown RBP9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Trip6Q9Z1Y4 480 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Knop1Q9Z2Q2 478 aaKnown RBP9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Homer1Q9Z2Y3 366 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tubb4bP68372 445 aaKnown RBP9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ssrp1Q08943 708 aaKnown RBP9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Prpf38aQ4FK66 312 aaKnown RBP9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Hspa4Q61316 841 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tmem59lQ7TNI2 337 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 LpxnQ99N69 386 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Mrps25Q9D125 171 aaKnown RBP9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Hmgb1P63158 215 aaKnown RBP9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 HibadhQ99L13 335 aaKnown RBP9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Zfp853A0A1D5RM95 733 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Vmn2r68L7N2B3 851 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Myo1aO88329 1043 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Uri1Q3TLD5 531 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Eno4Q8C042 619 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rps6ka5Q8C050 863 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 TxlnbQ8VBT1 685 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tubgcp2Q921G8 905 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Slfn1Q9Z0I7 337 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 A0A1W2P6Q8 802 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Gm9048A0A1W2P7H4 802 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 A0A1W2P7Z8 802 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Gm9046A0A1W2P855 802 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 DmtnQ9WV69 405 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Dlg5E9Q9R9 1921 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Sall1Q9ER74 1322 aa9.59□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tex13cD3YU32 604 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Znf496Q5SXI5 585 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Zfp251Q6PCX8 632 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gng11P61953 73 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tbc1d30Q69ZT9 766 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hps3Q91VB4 1002 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Col18a1P39061 1774 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Nfil3O08750 462 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Scg2Q03517 617 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Specc1lQ2KN98 1118 aaKnown RBP9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ccdc189Q6NZQ0 333 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Atp2b4Q6Q477 1205 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tacc2Q9JJG0 1149 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gpaa1Q9WTK3 621 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Rgs12Q8CGE9 1381 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Plekhg2Q6KAU7 1340 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Arhgap33Q80YF9 1305 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Palm3A2TJV2 734 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Kif3cO35066 796 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pla2g4eQ50L42 875 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Cul5Q9D5V5 780 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 IkQ9Z1M8 557 aaKnown RBP9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gli3Q61602 1583 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 NpcdF8VQB8 469 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pafah1b1P63005 410 aaKnown RBP9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pcdhb14Q6PB90 796 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Clec16aQ80U30 1036 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 AmfrQ9R049 643 aa9.58□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Krt24A1L317 512 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 MthfslL7N466 203 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Kifc2O08672 792 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Pak1O88643 545 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Frat1P70339 274 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Eya3P97480 510 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Csrnp2Q8BGQ2 534 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Nod2Q8K3Z0 1020 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Exoc1Q8R3S6 894 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gm13023A2A8N2 498 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ankrd63A2ARS0 390 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Sept9Q80UG5 583 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Enox1Q8BHR2 643 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Sec62Q8BU14 398 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tbc1d23Q8K0F1 684 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ddx27Q921N6 760 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Fam76aQ922G2 307 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Egfl6Q9JJZ5 550 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Aox3G3X982 1335 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gm10378F6XQQ1 160 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tubb2aQ7TMM9 445 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Zfp397Q7TNK4 527 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Srp68Q8BMA6 625 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Tubb2bQ9CWF2 445 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ifi35Q9D8C4 286 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Acad12D3Z7X0 555 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Mtx1P47802 317 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Mybl2P48972 704 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Armc2Q3URY6 854 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ctr9Q62018 1173 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Asic1Q6NXK8 526 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Kdm1aQ6ZQ88 853 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ube3cQ80U95 1083 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Dclk3Q8BWQ5 790 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Fam193aQ8CGI1 1231 aaKnown RBP9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Hps4Q99KG7 671 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Gm30191A0A0U1RNT7 187 aa9.57□□□□□ -0.88
Sf3b1-201ENSMUST00000027127 Ankrd40Q5SUE8 363 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms