RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 ApobrQ8VBT6 942 aa13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Card14Q99KF0 999 aa13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Plekho1Q9JIY0 408 aa13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Uso1Q9Z1Z0 959 aaKnown RBP13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tnks1bp1P58871 1720 aa13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 FocadA2AKG8 1798 aa13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 GdaQ9R111 454 aa13.63□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Col3a1P08121 1464 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Dennd3A2RT67 1274 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Bin2D3Z6Q9 489 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Traf1P39428 409 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tdo2P48776 406 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ttc12Q8BW49 704 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tcp11l2Q8K1H7 517 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Cap2Q9CYT6 476 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Lama4P97927 1816 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Pola2P33611 600 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Kiaa1468Q148V7 1216 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Lrriq3Q14DL3 633 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Zcchc17Q9ESX4 241 aaKnown RBP13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Txnrd1Q9JMH6 613 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Dpf1Q9QX66 387 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Pdcd6ipQ9WU78 869 aaKnown RBP13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Il7P10168 154 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Smarcc1P97496 1104 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Gucy2cQ3UWA6 1072 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Rbm12b2Q66JV4 834 aaKnown RBP13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Hpcal4Q8BGZ1 191 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Apol10aQ8CCA5 318 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Rrp1bQ91YK2 724 aaKnown RBP13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Etnk1Q9D4V0 363 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ccdc83Q9D4V3 305 aa13.62□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Rfc1P35601 1131 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Plbd2Q3TCN2 594 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ccdc114Q3UX62 658 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Krt222Q8CCX5 294 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Hexim1Q8R409 356 aaKnown RBP13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Mylk2Q8VCR8 613 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Sirt2Q8VDQ8 389 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Thap2Q9D305 217 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Mroh6V9GX81 722 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Gnat2P50149 354 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Caps2Q8BUG5 550 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Phldb3E9QAF4 648 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Exoc8Q6PGF7 716 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Abtb2Q7TQI7 1024 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tango6Q8C3S2 1079 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Q8K2W9 541 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Cbx8Q9QXV1 362 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 AmfrQ9R049 643 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Pard3Q99NH2 1333 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Gm42641I6L9G2 585 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Cd3dP04235 173 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 AtripQ8BMG1 785 aa13.61□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Myh7Q91Z83 1935 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 4932429P05RikA2ADI4 785 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Cnga2Q62398 664 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Cyp4x1Q6A152 507 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Glis3Q6XP49 780 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Top1Q04750 767 aaKnown RBP13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 VeztQ3ZK22 780 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tas2r124Q7M718 309 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Pold4Q9CWP8 107 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ipo7Q9EPL8 1038 aaKnown RBP13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 LbrQ3U9G9 626 aaKnown RBP13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Klhl10Q9D5V2 608 aa13.6□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tbc1d2B1AVH7 922 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Tubb5P99024 444 aaKnown RBP13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Mrps31Q61733 384 aaKnown RBP13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ufl1Q8CCJ3 793 aaKnown RBP13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ubac1Q8VDI7 409 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Col4a1P02463 1669 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Crb1Q8VHS2 1405 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Unc13bQ9Z1N9 1602 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Cep85Q8BMK0 761 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Olfm5Q8BU90 496 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Terb1Q8C0V1 768 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Nod2Q8K3Z0 1020 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Stag1Q9D3E6 1258 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Ranbp1P34022 203 aaKnown RBP13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 FntaQ61239 377 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Taf6lQ8R2K4 616 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Pcdha12Q91Y18 950 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Itga2bQ9QUM0 1033 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Eif2ak3Q9Z2B5 1114 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Snapc4Q8BP86 1333 aa13.59□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Rgs22G3UYX5 1258 aa13.58□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Pak1O88643 545 aa13.58□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Vsnl1P62761 191 aa13.58□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Fam89aQ14BJ1 175 aa13.58□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Nme8Q715T0 586 aa13.58□□□□□ -0.23
Rfx1-201ENSMUST00000005600 FliiQ9JJ28 1271 aa13.58□□□□□ -0.23
Rfx1-201ENSMUST00000005600 Myh1Q5SX40 1942 aa13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Cul4bA2A432 970 aaKnown RBP13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Gm4340L7N2C4 268 aa13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Api5O35841 504 aaKnown RBP13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Ica1lQ3TY65 431 aa13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Tsr1Q5SWD9 803 aa13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Fam217aQ9D9W6 419 aa13.58□□□□□ -0.24
Rfx1-201ENSMUST00000005600 Efcc1Q9JJF6 558 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms