RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Fchsd1Q6PFY1 688 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Pcdha12Q91Y18 950 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 NapgQ9CWZ7 312 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Dbndd1Q9CZ00 160 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Clip2Q9Z0H8 1047 aa10.68□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Setdb1O88974 1307 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Calm1P0DP26 149 aaKnown RBP10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Calm2P0DP27 149 aaKnown RBP10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Calm3P0DP28 149 aaKnown RBP10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Fam83bQ0VBM2 1012 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 ErmnQ5EBJ4 281 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Usp49Q6P9L4 685 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 LpxnQ99N69 386 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Pkd2l2Q9JLG4 621 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm30191A0A0U1RNT7 187 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Stox1B2RQL2 990 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Phldb3E9QAF4 648 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Kif3cO35066 796 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Enc1O35709 589 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ranbp1P34022 203 aaKnown RBP10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Tmem109Q3UBX0 243 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Fam177a1Q8BR63 207 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm10378F6XQQ1 160 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 NpcdF8VQB8 469 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cd3dP04235 173 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Grin1P35438 938 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sparcl1P70663 650 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Tbc1d30Q69ZT9 766 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Asic3Q6X1Y6 530 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Slc44a1Q6X893 653 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Stac3Q8BZ71 360 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Wdr64Q9D565 1086 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 EhhadhQ9DBM2 718 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cd274Q9EP73 290 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Pard3Q99NH2 1333 aa10.67□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Zfpm1O35615 995 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Pla2g4bP0C871 782 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Rad23aP54726 363 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Llgl2Q3TJ91 1027 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Mcm7Q61881 719 aaKnown RBP10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Hps6Q8BLY7 805 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sde2Q8K1J5 448 aaKnown RBP10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Themis2Q91YX0 663 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Dydc1Q9D9T0 175 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ftsj3Q9DBE9 838 aaKnown RBP10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Carmil3Q3UFQ8 1375 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 A0A1W2P6Q8 802 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm9048A0A1W2P7H4 802 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 A0A1W2P7S8 802 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 A0A1W2P7Z8 802 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm9046A0A1W2P855 802 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Apol7aB2RT54 418 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ccng2O08918 344 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cdc5lQ6A068 802 aaKnown RBP10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Fam102bQ8BQS4 339 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Zc3h6Q8BYK8 1177 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ift172Q6VH22 1749 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Prr5lA2AVJ5 370 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Spocd1B1ASB6 936 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Bbof1Q3V079 533 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cyp7b1Q60991 507 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Kif1bpQ6ZPU9 617 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Vstm4T1NXB5 319 aa10.66□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Zfp853A0A1D5RM95 733 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gpbp1Q6NXH3 473 aaKnown RBP10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Kif2bQ8C0N1 668 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Foxo3Q9WVH4 672 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Rgs12Q8CGE9 1381 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm5934D3Z4U6 212 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Usp53P15975 1069 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Wdr70Q3TWF6 657 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Kdm1aQ6ZQ88 853 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Tas2r124Q7M718 309 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Terb1Q8C0V1 768 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Hgh1Q8C3I8 393 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Epc1Q8C9X6 813 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Tcp11l2Q8K1H7 517 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ppil4Q9CXG3 492 aaKnown RBP10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Fbxo3Q9DC63 480 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cyp2c23E9Q5K4 494 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Zfp597E9Q6S0 419 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gm10134F6ZQC6 126 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sik1Q60670 779 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ces3aQ63880 571 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Cyp4x1Q6A152 507 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Enox1Q8BHR2 643 aaKnown RBP10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Gimap7Q8R379 293 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Ces3bQ8VCU1 571 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 BaatQ91X34 420 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Q9D5Q8 446 aa10.65□□□□□ -0.7
Col6a1-201ENSMUST00000001147 Sox5P35710 763 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Plcb3P51432 1234 aaKnown RBP10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Hdhd2Q3UGR5 259 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Spg7Q3ULF4 781 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Dpf2Q61103 391 aaKnown RBP10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Prpf40bQ80W14 870 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Susd4Q8BH32 490 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Cc2d1bQ8BRN9 848 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Q8CEZ4 452 aa10.65□□□□□ -0.71
Col6a1-201ENSMUST00000001147 Ccdc14Q8K2J4 934 aa10.65□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms