RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C YTP1P53584 459 aa7.04□□□□□ -1.28
LDB7YBL006C NRD1P53617 575 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28 RIP-Chip
LDB7YBL006C YPL113CQ02961 396 aa7.04□□□□□ -1.28
LDB7YBL006C ATG16Q03818 150 aa7.04□□□□□ -1.28
LDB7YBL006C RPS10AQ08745 105 aaPredicted RBP7.04□□□□□ -1.28
LDB7YBL006C OCA6Q12454 224 aa7.04□□□□□ -1.28
LDB7YBL006C Q0182Q9ZZW1 134 aa7.04□□□□□ -1.28
LDB7YBL006C ERG11P10614 530 aa7.03□□□□□ -1.28
LDB7YBL006C PDR1P12383 1068 aa7.03□□□□□ -1.28
LDB7YBL006C DBF4P32325 704 aa7.03□□□□□ -1.28
LDB7YBL006C BLI1P35727 113 aa7.03□□□□□ -1.28
LDB7YBL006C ALY1P36117 915 aa7.03□□□□□ -1.28
LDB7YBL006C PMC1P38929 1173 aaPredicted RBP7.03□□□□□ -1.28
LDB7YBL006C PAN6P40459 309 aa7.03□□□□□ -1.28
LDB7YBL006C TRF5P48561 642 aaKnown RBP7.03□□□□□ -1.28
LDB7YBL006C SNO2P53823 222 aa7.03□□□□□ -1.28
LDB7YBL006C IPI3P53877 555 aa7.03□□□□□ -1.28
LDB7YBL006C UFO1Q04511 668 aa7.03□□□□□ -1.28
LDB7YBL006C SWC7Q06707 132 aa7.03□□□□□ -1.28
LDB7YBL006C OPY2Q06810 360 aa7.03□□□□□ -1.28
LDB7YBL006C PRP8P33334 2413 aaKnown RBP7.03□□□□□ -1.28
LDB7YBL006C LEU1P07264 779 aaKnown RBP7.02□□□□□ -1.29
LDB7YBL006C MTF2P10849 440 aa7.02□□□□□ -1.29
LDB7YBL006C CLC1P17891 233 aa7.02□□□□□ -1.29
LDB7YBL006C ERG6P25087 383 aaKnown RBP7.02□□□□□ -1.29
LDB7YBL006C YCR015CP25616 317 aa7.02□□□□□ -1.29
LDB7YBL006C CIN8P27895 1000 aa7.02□□□□□ -1.29
LDB7YBL006C MEI4P29467 408 aa7.02□□□□□ -1.29
LDB7YBL006C MCM2P29469 868 aa7.02□□□□□ -1.29
LDB7YBL006C KNS1P32350 737 aaPredicted RBP7.02□□□□□ -1.29
LDB7YBL006C LIP5P32875 414 aa7.02□□□□□ -1.29
LDB7YBL006C YKL151CP36059 337 aa7.02□□□□□ -1.29
LDB7YBL006C TAE1P38340 232 aa7.02□□□□□ -1.29
LDB7YBL006C BIT2P38346 545 aa7.02□□□□□ -1.29
LDB7YBL006C RAD26P40352 1085 aa7.02□□□□□ -1.29
LDB7YBL006C YJL070CP40361 888 aa7.02□□□□□ -1.29
LDB7YBL006C ATM1P40416 690 aa7.02□□□□□ -1.29
LDB7YBL006C DUG1P43616 481 aaKnown RBP7.02□□□□□ -1.29
LDB7YBL006C SUM1P46676 1062 aa7.02□□□□□ -1.29
LDB7YBL006C GLG2P47011 380 aa7.02□□□□□ -1.29
LDB7YBL006C IML2P47031 731 aa7.02□□□□□ -1.29
LDB7YBL006C NOG2P53742 486 aaKnown RBP7.02□□□□□ -1.29
LDB7YBL006C SWS2P53937 143 aa7.02□□□□□ -1.29
LDB7YBL006C VPS9P54787 451 aa7.02□□□□□ -1.29
LDB7YBL006C TPO1Q07824 586 aa7.02□□□□□ -1.29
LDB7YBL006C SFI1Q12369 946 aa7.02□□□□□ -1.29
LDB7YBL006C EFG1Q3E705 233 aaKnown RBP7.02□□□□□ -1.29
LDB7YBL006C MNE1P24720 663 aa7.01□□□□□ -1.29
LDB7YBL006C PMI40P29952 429 aaKnown RBP7.01□□□□□ -1.29
LDB7YBL006C MVP1P40959 511 aaKnown RBP7.01□□□□□ -1.29
LDB7YBL006C YJR124CP47159 448 aa7.01□□□□□ -1.29
LDB7YBL006C BRO1P48582 844 aa7.01□□□□□ -1.29
LDB7YBL006C RFX1P48743 811 aa7.01□□□□□ -1.29
LDB7YBL006C NBP35P52920 328 aa7.01□□□□□ -1.29
LDB7YBL006C YGR127WP53275 312 aa7.01□□□□□ -1.29
LDB7YBL006C TRM82Q03774 444 aa7.01□□□□□ -1.29
LDB7YBL006C YPR114WQ06107 315 aa7.01□□□□□ -1.29
LDB7YBL006C YFT2Q06676 274 aa7.01□□□□□ -1.29
LDB7YBL006C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
LDB7YBL006C CMS1Q07897 291 aaKnown RBP7.01□□□□□ -1.29
LDB7YBL006C APL4Q12028 832 aa7.01□□□□□ -1.29
LDB7YBL006C SRO7Q12038 1033 aa7.01□□□□□ -1.29
LDB7YBL006C GNT1Q12096 491 aa7.01□□□□□ -1.29
LDB7YBL006C AIR2Q12476 344 aaKnown RBP7.01□□□□□ -1.29
LDB7YBL006C YEL077CQ3E7X8 1277 aa7.01□□□□□ -1.29
LDB7YBL006C RAD10P06838 210 aa7□□□□□ -1.29
LDB7YBL006C SNF5P18480 905 aa7□□□□□ -1.29
LDB7YBL006C PMA2P19657 947 aa7□□□□□ -1.29
LDB7YBL006C RRT2P38332 387 aa7□□□□□ -1.29
LDB7YBL006C PPE1P38796 400 aa7□□□□□ -1.29
LDB7YBL006C SPC72P39723 622 aa7□□□□□ -1.29
LDB7YBL006C ERV46P39727 415 aa7□□□□□ -1.29
LDB7YBL006C LTP1P40347 161 aa7□□□□□ -1.29
LDB7YBL006C DSN1P40568 576 aa7□□□□□ -1.29
LDB7YBL006C SET2P46995 733 aaKnown RBP7□□□□□ -1.29
LDB7YBL006C SUN4P53616 420 aa7□□□□□ -1.29
LDB7YBL006C VAC7P53950 1165 aa7□□□□□ -1.29
LDB7YBL006C NGL3Q03210 505 aa7□□□□□ -1.29
LDB7YBL006C UTP5Q04177 643 aaKnown RBP7□□□□□ -1.29
LDB7YBL006C THI7Q05998 598 aa7□□□□□ -1.29
LDB7YBL006C TRE2Q08693 809 aa7□□□□□ -1.29
LDB7YBL006C PGC1Q08959 321 aa7□□□□□ -1.29
LDB7YBL006C DAS2Q12084 232 aa7□□□□□ -1.29
LDB7YBL006C SEY1Q99287 776 aa7□□□□□ -1.29
LDB7YBL006C COX5AP00424 153 aa6.99□□□□□ -1.29
LDB7YBL006C SUC2P00724 532 aa6.99□□□□□ -1.29
LDB7YBL006C MPH2P0CD99 609 aa6.99□□□□□ -1.29
LDB7YBL006C SCH9P11792 824 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C SEC23P15303 768 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C RAD57P25301 460 aa6.99□□□□□ -1.29
LDB7YBL006C PAT1P25644 796 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C BRF1P29056 596 aa6.99□□□□□ -1.29
LDB7YBL006C HXT1P32465 570 aa6.99□□□□□ -1.29
LDB7YBL006C MRS6P32864 603 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C PDR3P33200 976 aa6.99□□□□□ -1.29
LDB7YBL006C MPE1P35728 441 aaKnown RBP6.99□□□□□ -1.29
LDB7YBL006C TGL4P36165 910 aa6.99□□□□□ -1.29
LDB7YBL006C PCA1P38360 1216 aa6.99□□□□□ -1.29
LDB7YBL006C YHL041WP38730 149 aa6.99□□□□□ -1.29
LDB7YBL006C OTU2P38747 307 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms