RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-228ENST00000641847 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
PHGDH-228ENST00000641847 IL1R1P14778 569 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-228ENST00000641847 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-228ENST00000641847 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 TDRD7Q8NHU6 1098 aaKnown RBP11.35□□□□□ -0.59
PHGDH-228ENST00000641847 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 FSD1Q9BTV5 496 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 COL25A1Q9BXS0 654 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-228ENST00000641847 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 MYH7P12883 1935 aa11.35□□□□□ -0.59
PHGDH-228ENST00000641847 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 BTBD19C9JJ37 291 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-228ENST00000641847 SGPL1O95470 568 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 OSBPP22059 807 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 BMP8BP34820 402 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
PHGDH-228ENST00000641847 CERS5Q8N5B7 392 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
PHGDH-228ENST00000641847 ANTXR1Q9H6X2 564 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 JAG2Q9Y219 1238 aa11.34□□□□□ -0.59
PHGDH-228ENST00000641847 CDC45O75419 566 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-228ENST00000641847 FCGRTP55899 365 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 TTF1Q15361 905 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-228ENST00000641847 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 KBTBD3Q8NAB2 608 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
PHGDH-228ENST00000641847 ZNF70Q9UC06 446 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-228ENST00000641847 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 PCDHAC2Q9Y5I4 1007 aa11.33□□□□□ -0.6
PHGDH-228ENST00000641847 MYO5AQ9Y4I1 1855 aaKnown RBP11.33□□□□□ -0.6
PHGDH-228ENST00000641847 LAMB1P07942 1786 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 TCP10L2B9ZVM9 353 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 PPIL2Q13356 520 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 LRIT3Q3SXY7 679 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 FAM205AQ6ZU69 1335 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
PHGDH-228ENST00000641847 EYSQ5T1H1 3165 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 PDHXO00330 501 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 IRF6O14896 467 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 IDH1O75874 414 aaKnown RBP11.31□□□□□ -0.6
PHGDH-228ENST00000641847 CASC1Q6TDU7 716 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 Q7L0L9 218 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 ANKRD23Q86SG2 305 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
PHGDH-228ENST00000641847 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 WRNIP1Q96S55 665 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 GDF15Q99988 308 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.31□□□□□ -0.61e-14■□□□□ 11
PHGDH-228ENST00000641847 UNC93B1Q9H1C4 597 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
PHGDH-228ENST00000641847 MTMR10Q9NXD2 777 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 TMOD2Q9NZR1 351 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 ABCF2Q9UG63 623 aa11.31□□□□□ -0.6
PHGDH-228ENST00000641847 TTF2Q9UNY4 1162 aaKnown RBP11.31□□□□□ -0.6
PHGDH-228ENST00000641847 HIP1O00291 1037 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 CHMLP26374 656 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 PRKCZQ05513 592 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 PPATQ06203 517 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
PHGDH-228ENST00000641847 C8orf34Q49A92 452 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 DCAF15Q66K64 600 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 TDHQ8IZJ6 230 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 TEPSINQ96N21 525 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 DEFB118Q96PH6 123 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 PARK7Q99497 189 aaKnown RBP11.3□□□□□ -0.6
PHGDH-228ENST00000641847 TMEM39BQ9GZU3 492 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
PHGDH-228ENST00000641847 SPTBN5Q9NRC6 3674 aaKnown RBP11.3□□□□□ -0.6
PHGDH-228ENST00000641847 RNF113AO15541 343 aaKnown RBP11.29□□□□□ -0.6
PHGDH-228ENST00000641847 ADCY3O60266 1144 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 CHGBP05060 677 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 PDE6AP16499 860 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-228ENST00000641847 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 SPTY2D1Q68D10 685 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-228ENST00000641847 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 ZKSCAN4Q969J2 545 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-228ENST00000641847 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
PHGDH-228ENST00000641847 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
PHGDH-228ENST00000641847 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 INHAP05111 366 aa11.28□□□□□ -0.6
PHGDH-228ENST00000641847 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
PHGDH-228ENST00000641847 ZFYP08048 801 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms