RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SMIM22K7EJ46 135 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 STX6O43752 255 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 PRDM1O75626 825 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 PDIA3P30101 505 aaKnown RBP10.37□□□□□ -0.75
PHGDH-219ENST00000641513 PDE4BQ07343 736 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 WTAPQ15007 396 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 SBK1Q52WX2 424 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 IFFO2Q5TF58 517 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 STRIP1Q5VSL9 837 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 LARP1BQ659C4 914 aaKnown RBP10.37□□□□□ -0.75
PHGDH-219ENST00000641513 KIAA0825Q8IV33 1275 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
PHGDH-219ENST00000641513 NCOA5Q9HCD5 579 aaKnown RBP10.37□□□□□ -0.75
PHGDH-219ENST00000641513 ZNF277Q9NRM2 450 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-219ENST00000641513 GAKO14976 1311 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 CPLX1O14810 134 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 ZBTB43O43298 467 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 JAK2O60674 1132 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 PCP11498 1178 aaKnown RBP10.36□□□□□ -0.75
PHGDH-219ENST00000641513 PDCP20941 246 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 SYT1P21579 422 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 CRKP46108 304 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 FOSBP53539 338 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 PICALMQ13492 652 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 FOXD4L6Q3SYB3 417 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-219ENST00000641513 DACT2Q5SW24 774 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-219ENST00000641513 NIM1KQ8IY84 436 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 FBXL16Q8N461 479 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-219ENST00000641513 PSMD1Q99460 953 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 LLPHQ9BRT6 129 aaKnown RBP10.36□□□□□ -0.75
PHGDH-219ENST00000641513 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 USP40Q9NVE5 1235 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 ZDHHC9Q9Y397 364 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 SLC12A7Q9Y666 1083 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 DDX49Q9Y6V7 483 aaKnown RBP10.36□□□□□ -0.75
PHGDH-219ENST00000641513 MYH4Q9Y623 1939 aa10.36□□□□□ -0.75
PHGDH-219ENST00000641513 SNED1Q8TER0 1413 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 PTPDC1A2A3K4 754 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 GOLGA8AA7E2F4 631 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 H3BQV1 296 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 DHX16O60231 1041 aaKnown RBP10.35□□□□□ -0.75
PHGDH-219ENST00000641513 ZSCAN22P10073 491 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-219ENST00000641513 METAP2P50579 478 aaKnown RBP eCLIP10.35□□□□□ -0.751e-10■■■□□ 15.8
PHGDH-219ENST00000641513 FKBP1AP62942 108 aaKnown RBP10.35□□□□□ -0.75
PHGDH-219ENST00000641513 EVX2Q03828 476 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 CCDC173Q0VFZ6 552 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 C12orf60Q5U649 245 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 MCTP1Q6DN14 999 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 HHIPL2Q6UWX4 724 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 CCDC144CPQ8IYA2 1237 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 DYNLL2Q96FJ2 89 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 PPP1R9BQ96SB3 815 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 CD2APQ9Y5K6 639 aa10.35□□□□□ -0.75
PHGDH-219ENST00000641513 TNKSO95271 1327 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 FLT1P17948 1338 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 TSPY2A6NKD2 308 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 YDJCA8MPS7 323 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 ORC4O43929 436 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 RAD17O75943 681 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 RXRAP19793 462 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 LIFRP42702 1097 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 EVCP57679 992 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 RHBDL3P58872 404 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 HS1BP3Q53T59 392 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 CPLX2Q6PUV4 134 aaKnown RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 APOA5Q6Q788 366 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 ZNF444Q8N0Y2 327 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 TMTC2Q8N394 836 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 NSUN7Q8NE18 718 aaKnown RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 ZSCAN10Q96SZ4 725 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 MYL10Q9BUA6 226 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
PHGDH-219ENST00000641513 DICER1Q9UPY3 1922 aaKnown RBP10.34□□□□□ -0.75
PHGDH-219ENST00000641513 CDKL5O76039 1030 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 CTDNEP1O95476 244 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 F13A1P00488 732 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 IFIT1BQ5T764 474 aaKnown RBP10.33□□□□□ -0.76
PHGDH-219ENST00000641513 CDC42EP5Q6NZY7 148 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 SMARCC2Q8TAQ2 1214 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 SYAP1Q96A49 352 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-219ENST00000641513 MTA3Q9BTC8 594 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 GZF1Q9H116 711 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-219ENST00000641513 TAOK3Q9H2K8 898 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 ZNF287Q9HBT7 754 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 MKRN1Q9UHC7 482 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms