RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
PHGDH-212ENST00000641247 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
PHGDH-212ENST00000641247 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-212ENST00000641247 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-212ENST00000641247 ATN1P54259 1190 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-212ENST00000641247 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
PHGDH-212ENST00000641247 USP38Q8NB14 1042 aa12.18□□□□□ -0.46
PHGDH-212ENST00000641247 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-212ENST00000641247 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
PHGDH-212ENST00000641247 SENP6Q9GZR1 1112 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-212ENST00000641247 MORF4L1Q9UBU8 362 aa12.18□□□□□ -0.46
PHGDH-212ENST00000641247 EYSQ5T1H1 3165 aa12.18□□□□□ -0.46
PHGDH-212ENST00000641247 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
PHGDH-212ENST00000641247 IFIT1P09914 478 aaKnown RBP12.17□□□□□ -0.46
PHGDH-212ENST00000641247 JAG1P78504 1218 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 PICALMQ13492 652 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 PUM3Q15397 648 aaKnown RBP12.17□□□□□ -0.46
PHGDH-212ENST00000641247 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-212ENST00000641247 ANP32EQ9BTT0 268 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 PORCNQ9H237 461 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 RBPJLQ9UBG7 517 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
PHGDH-212ENST00000641247 GAKO14976 1311 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 IL16Q14005 1332 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 XRCC5P13010 732 aaKnown RBP12.16□□□□□ -0.46
PHGDH-212ENST00000641247 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 ZNF384Q8TF68 577 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 LPIN2Q92539 896 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 PLXNB2O15031 1838 aa12.16□□□□□ -0.46
PHGDH-212ENST00000641247 SALL1Q9NSC2 1324 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 TBC1D12O60347 775 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 PHKA1P46020 1223 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 RHBDL3P58872 404 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 SHROOM1Q2M3G4 852 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-212ENST00000641247 MORN1Q5T089 497 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-212ENST00000641247 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 PHIPQ8WWQ0 1821 aa12.15□□□□□ -0.46
PHGDH-212ENST00000641247 EYA2O00167 538 aa12.14□□□□□ -0.47
PHGDH-212ENST00000641247 TNFRSF10AO00220 468 aa12.14□□□□□ -0.47
PHGDH-212ENST00000641247 SLC5A1P13866 664 aa12.14□□□□□ -0.47
PHGDH-212ENST00000641247 BTDP43251 543 aa12.14□□□□□ -0.47
PHGDH-212ENST00000641247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■□ 19.6
PHGDH-212ENST00000641247 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
PHGDH-212ENST00000641247 SALL2Q9Y467 1007 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-212ENST00000641247 CDH23Q9H251 3354 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 FOSL2P15408 326 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-212ENST00000641247 ITGB8P26012 769 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 ADORA1P30542 326 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 CAP2P40123 477 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 RTP1P59025 263 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 GRIN2CQ14957 1233 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 TRPV1Q8NER1 839 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
PHGDH-212ENST00000641247 BADQ92934 168 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-212ENST00000641247 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-212ENST00000641247 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
PHGDH-212ENST00000641247 PTPRFP10586 1907 aa12.12□□□□□ -0.47
PHGDH-212ENST00000641247 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-212ENST00000641247 EPHB4P54760 987 aa12.12□□□□□ -0.47
PHGDH-212ENST00000641247 HERVK_113P62684 666 aa12.12□□□□□ -0.47
PHGDH-212ENST00000641247 MTMR2Q13614 643 aa12.12□□□□□ -0.47
PHGDH-212ENST00000641247 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
PHGDH-212ENST00000641247 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
PHGDH-212ENST00000641247 GPR75-ASB3A0A0A6YYF3 556 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 TRIM43BA6NCK2 446 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 CNMDO75829 334 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 BACE1P56817 501 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
PHGDH-212ENST00000641247 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHGDH-212ENST00000641247 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 TRIM43Q96BQ3 446 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-212ENST00000641247 DDX20Q9UHI6 824 aaKnown RBP12.11□□□□□ -0.47
PHGDH-212ENST00000641247 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 ATP11BQ9Y2G3 1177 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
PHGDH-212ENST00000641247 IGHA2P01877 340 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 PLA2G5P39877 138 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 RGS2P41220 211 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 ERVK-24P63145 666 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-212ENST00000641247 CCDC102BQ68D86 513 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 SLC39A5Q6ZMH5 540 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 PLEKHH3Q7Z736 793 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
PHGDH-212ENST00000641247 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms