RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 PPARAQ07869 468 aa25.67■■□□□ 1.7
TSPAN9-208ENST00000640568 IMMTQ16891 758 aaKnown RBP25.67■■□□□ 1.7
TSPAN9-208ENST00000640568 MIGA2Q7L4E1 593 aa25.67■■□□□ 1.7
TSPAN9-208ENST00000640568 FOXP4Q8IVH2 680 aaPredicted RBP25.67■■□□□ 1.7
TSPAN9-208ENST00000640568 HERC5Q9UII4 1024 aaKnown RBP25.67■■□□□ 1.7
TSPAN9-208ENST00000640568 RBM8AQ9Y5S9 174 aaKnown RBP25.67■■□□□ 1.7
TSPAN9-208ENST00000640568 ZNF213O14771 459 aa25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 PPP1R12BO60237 982 aaPredicted RBP25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 TTLL12Q14166 644 aaPredicted RBP25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 EHD4Q9H223 541 aa25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.66■■□□□ 1.75e-6■■■□□ 17
TSPAN9-208ENST00000640568 CELF2O95319 508 aaKnown RBP25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 HAND2P61296 217 aa25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 FMR1Q06787 632 aaKnown RBP eCLIP25.66■■□□□ 1.7
TSPAN9-208ENST00000640568 SSC5DA1L4H1 1573 aa25.65■■□□□ 1.7
TSPAN9-208ENST00000640568 PRKG1Q13976 671 aa25.65■■□□□ 1.7
TSPAN9-208ENST00000640568 STK11IPQ8N1F8 1099 aa25.65■■□□□ 1.7
TSPAN9-208ENST00000640568 ZNF341Q9BYN7 854 aa25.65■■□□□ 1.7
TSPAN9-208ENST00000640568 TBC1D12O60347 775 aa25.64■■□□□ 1.69
TSPAN9-208ENST00000640568 SWAP70Q9UH65 585 aa25.64■■□□□ 1.69
TSPAN9-208ENST00000640568 ROBO3Q96MS0 1386 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 PAPPA2Q9BXP8 1791 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 FAM196BA6NMK8 535 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 EVX2Q03828 476 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 CTDSPL2Q05D32 466 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 ARMC9Q7Z3E5 817 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 DYNLL2Q96FJ2 89 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 ZNF287Q9HBT7 754 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 TAOK2Q9UL54 1235 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 PASKQ96RG2 1323 aa25.63■■□□□ 1.69
TSPAN9-208ENST00000640568 EPB41L2O43491 1005 aaKnown RBP25.62■■□□□ 1.69
TSPAN9-208ENST00000640568 IREB2P48200 963 aaKnown RBP25.62■■□□□ 1.69
TSPAN9-208ENST00000640568 PDE4BQ07343 736 aa25.62■■□□□ 1.69
TSPAN9-208ENST00000640568 RNF20Q5VTR2 975 aa25.62■■□□□ 1.69
TSPAN9-208ENST00000640568 ANAPC4Q9UJX5 808 aa25.62■■□□□ 1.69
TSPAN9-208ENST00000640568 MCCP23508 829 aa25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 C16orf86Q6ZW13 317 aa25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 C2orf69Q8N8R5 385 aa25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 MKNK2Q9HBH9 465 aa25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 GBA2Q9HCG7 927 aaPredicted RBP25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 ANGEL1Q9UNK9 670 aaKnown RBP25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 ATAD5Q96QE3 1844 aa25.61■■□□□ 1.69
TSPAN9-208ENST00000640568 SLURP2P0DP57 97 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 GABPAQ06546 454 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 METTL16Q86W50 562 aaKnown RBP25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 RNF41Q9H4P4 317 aaPredicted RBP25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 FZD1Q9UP38 647 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 OTOFQ9HC10 1997 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 SMIM22K7EJ46 135 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 CDK8P49336 464 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 MAP3K10Q02779 954 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 WRNIP1Q96S55 665 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 DNAJC18Q9H819 358 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 TOMM22Q9NS69 142 aa25.6■■□□□ 1.69
TSPAN9-208ENST00000640568 USP2O75604 605 aaPredicted RBP25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 CYP21A2P08686 494 aa25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 FKBP1BP68106 108 aa25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 CREB3L3Q68CJ9 461 aa25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 MFSD6Q6ZSS7 791 aa25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 SLC44A5Q8NCS7 719 aa25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 USP26Q9BXU7 913 aa25.59■■□□□ 1.69
TSPAN9-208ENST00000640568 SLC27A2O14975 620 aa25.58■■□□□ 1.69
TSPAN9-208ENST00000640568 SEC24BO95487 1268 aa25.58■■□□□ 1.69
TSPAN9-208ENST00000640568 NECTIN1Q15223 517 aa25.58■■□□□ 1.69
TSPAN9-208ENST00000640568 AKNAD1Q5T1N1 836 aa25.58■■□□□ 1.69
TSPAN9-208ENST00000640568 KLRG1Q96E93 195 aa25.58■■□□□ 1.69
TSPAN9-208ENST00000640568 UPF2Q9HAU5 1272 aaKnown RBP25.58■■□□□ 1.69
TSPAN9-208ENST00000640568 DOCK1Q14185 1865 aa25.58■■□□□ 1.68
TSPAN9-208ENST00000640568 PCP11498 1178 aaKnown RBP25.57■■□□□ 1.68
TSPAN9-208ENST00000640568 ZKSCAN1P17029 563 aaPredicted RBP25.57■■□□□ 1.68
TSPAN9-208ENST00000640568 SHMT1P34896 483 aa25.57■■□□□ 1.68
TSPAN9-208ENST00000640568 CERKLQ49MI3 558 aaPredicted RBP25.57■■□□□ 1.68
TSPAN9-208ENST00000640568 STAG1Q8WVM7 1258 aa25.57■■□□□ 1.68
TSPAN9-208ENST00000640568 PRDM1O75626 825 aa25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 RRP12Q5JTH9 1297 aaKnown RBP25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 CST9Q5W186 159 aa25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 TATDN1Q6P1N9 297 aa25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 MOB2Q70IA6 237 aa25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 TBC1D10CQ8IV04 446 aa25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 ZNF444Q8N0Y2 327 aaPredicted RBP25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 CSADQ9Y600 493 aa25.56■■□□□ 1.68
TSPAN9-208ENST00000640568 HSPA4P34932 840 aa25.55■■□□□ 1.68
TSPAN9-208ENST00000640568 TRDNQ13061 729 aa25.55■■□□□ 1.68
TSPAN9-208ENST00000640568 MAP3K11Q16584 847 aa25.55■■□□□ 1.68
TSPAN9-208ENST00000640568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.55■■□□□ 1.68
TSPAN9-208ENST00000640568 NBPF3Q9H094 633 aa25.55■■□□□ 1.68
TSPAN9-208ENST00000640568 TMEM88BA6NKF7 163 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 PHF20L1A8MW92 1017 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 MPHOSPH10O00566 681 aaKnown RBP25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 MAP3K9P80192 1104 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 ANKRD13AQ8IZ07 590 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 BACH2Q9BYV9 841 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 CNNM2Q9H8M5 875 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 CABP5Q9NP86 173 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 ZNF112Q9UJU3 913 aa25.54■■□□□ 1.68
TSPAN9-208ENST00000640568 UBE2Q2LH0YL09 131 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 CTNND1O60716 968 aaKnown RBP25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 GDF11O95390 407 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 INPP5BP32019 993 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms