RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 UBAC1Q9BSL1 405 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 XPO4Q9C0E2 1151 aaKnown RBP10.35□□□□□ -0.75
RTTN-216ENST00000640376 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 IFNKQ9P0W0 207 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 ZNF804BA4D1E1 1349 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 CCZ1BP86790 482 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 CCZ1P86791 482 aaPredicted RBP10.35□□□□□ -0.75
RTTN-216ENST00000640376 GLIPR1L2Q4G1C9 344 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 SPECC1Q5M775 1068 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 RESP18Q5W5W9 173 aa10.35□□□□□ -0.75
RTTN-216ENST00000640376 RNF41Q9H4P4 317 aaPredicted RBP10.35□□□□□ -0.75
RTTN-216ENST00000640376 LAMB1P07942 1786 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 TNKSO95271 1327 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 SPATA31A5Q5VU36 1347 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 SPATA31A7Q8IWB4 1347 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 NEMFO60524 1076 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
RTTN-216ENST00000640376 TPM4P67936 248 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 RBM6P78332 1123 aaKnown RBP10.34□□□□□ -0.75
RTTN-216ENST00000640376 SAFBQ15424 915 aaKnown RBP eCLIP10.34□□□□□ -0.75
RTTN-216ENST00000640376 SMIM5Q71RC9 77 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 MTERF4Q7Z6M4 381 aaKnown RBP10.34□□□□□ -0.75
RTTN-216ENST00000640376 TIGD1Q96MW7 591 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 CUTAO60888 179 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 NCAPHQ15003 741 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 TMC6Q7Z403 805 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 DLEC1Q9Y238 1755 aa10.34□□□□□ -0.75
RTTN-216ENST00000640376 CYP2D7A0A087X1C5 515 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 DYNLL1P63167 89 aaKnown RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 NR5A1Q13285 461 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 ZNF592Q92610 1267 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 GNL3LQ9NVN8 582 aaKnown RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 DEXIO95424 95 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 TOB1P50616 345 aaPredicted RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 METTL16Q86W50 562 aaKnown RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 KCNH3Q9ULD8 1083 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 ATP1A3P13637 1013 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 ATP2B1P20020 1258 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 GRIN1Q05586 938 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 LONRF3Q496Y0 759 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 CRACR2BQ8N4Y2 399 aaPredicted RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 CNNM3Q8NE01 707 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 SMARCC1Q92922 1105 aaPredicted RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
RTTN-216ENST00000640376 TUBE1Q9UJT0 475 aa10.33□□□□□ -0.76
RTTN-216ENST00000640376 SMTNL1A8MU46 457 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 FOXN1O15353 648 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 PRDM1O75626 825 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 GSDMDP57764 484 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 CAVIN4Q5BKX8 364 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 KRBA2Q6ZNG9 492 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 ESR2Q92731 530 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 CELF1Q92879 486 aaKnown RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 RIOK1Q9BRS2 568 aaKnown RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 ZNF831Q5JPB2 1677 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 CCDC88AQ3V6T2 1871 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 KLRK1P26718 216 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 OSBPL5Q9H0X9 879 aaPredicted RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 MAST2Q6P0Q8 1798 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 UBE4AQ14139 1066 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 CEP135Q66GS9 1140 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 ENAHQ8N8S7 591 aaPredicted RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 FOXP1Q9H334 677 aaPredicted RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 BSDC1Q9NW68 430 aaPredicted RBP10.32□□□□□ -0.76
RTTN-216ENST00000640376 MINPP1Q9UNW1 487 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 PCDHB6Q9Y5E3 794 aa10.32□□□□□ -0.76
RTTN-216ENST00000640376 hCG_1642624A0A1W2PR95 340 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 IKBKBO14920 756 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 FANCCQ00597 558 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 MYL5Q02045 173 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 SEC23AQ15436 765 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 TBC1D9BQ66K14 1250 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 CLEC4GQ6UXB4 293 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 IMPACTQ9P2X3 320 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
RTTN-216ENST00000640376 COL24A1Q17RW2 1714 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 SF3B3Q15393 1217 aaKnown RBP10.31□□□□□ -0.76
RTTN-216ENST00000640376 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
RTTN-216ENST00000640376 RILPL1Q5EBL4 403 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 ARMCX5Q6P1M9 558 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 ZNF384Q8TF68 577 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 BCL11BQ9C0K0 894 aaPredicted RBP10.31□□□□□ -0.76
RTTN-216ENST00000640376 VPS54Q9P1Q0 977 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 ANAPC4Q9UJX5 808 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 PCDHA5Q9Y5H7 936 aa10.31□□□□□ -0.76
RTTN-216ENST00000640376 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
RTTN-216ENST00000640376 CTIFO43310 598 aaKnown RBP10.3□□□□□ -0.76
RTTN-216ENST00000640376 PRKCSHP14314 528 aaPredicted RBP10.3□□□□□ -0.76
RTTN-216ENST00000640376 AKAP17AQ02040 695 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms