RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 VPS16Q9H269 839 aa12.11□□□□□ -0.47
SLC35A3-220ENST00000640360 LLPHQ9BRT6 129 aaKnown RBP12.11□□□□□ -0.47
SLC35A3-220ENST00000640360 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
SLC35A3-220ENST00000640360 TAF1P21675 1872 aa12.11□□□□□ -0.47
SLC35A3-220ENST00000640360 GOLGA8HP0CJ92 632 aa12.11□□□□□ -0.47
SLC35A3-220ENST00000640360 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
SLC35A3-220ENST00000640360 NLRP12P59046 1061 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 ST5P78524 1137 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 MFSD6Q6ZSS7 791 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 NIP7Q9Y221 180 aaKnown RBP eCLIP12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 GJA10Q969M2 543 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 ENC1O14682 589 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 MCM7P33993 719 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 TXNRD3Q86VQ6 643 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 WDR17Q8IZU2 1322 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 DNA2P51530 1060 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
SLC35A3-220ENST00000640360 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 SMAP1Q8IYB5 467 aaPredicted RBP12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 PSMB7Q99436 277 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 MAN1B1Q9UKM7 699 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 CAMTA1Q9Y6Y1 1673 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 SOS2Q07890 1332 aaPredicted RBP12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 TRIM49BA6NDI0 452 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 RHOXF2BP0C7M4 288 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 SSRP1Q08945 709 aaKnown RBP12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 RHOXF2Q9BQY4 288 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 POLR3EQ9NVU0 708 aa12.09□□□□□ -0.47
SLC35A3-220ENST00000640360 WTAPQ15007 396 aa12.08□□□□□ -0.47
SLC35A3-220ENST00000640360 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.47
SLC35A3-220ENST00000640360 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.47
SLC35A3-220ENST00000640360 SASH3O75995 380 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 CMA1P23946 247 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 PTPROQ16827 1216 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 ZPR1O75312 459 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 STARD3NLO95772 234 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 MCM6Q14566 821 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 RTN1Q16799 776 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 MNS1Q8NEH6 495 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 DDX41Q9UJV9 622 aaKnown RBP12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 RBAK-RBAKDNI3L0D1 243 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 MYL5Q02045 173 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 ALDH8A1Q9H2A2 487 aaPredicted RBP12.08□□□□□ -0.48
SLC35A3-220ENST00000640360 TNKSO95271 1327 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 USP17L12C9JPN9 530 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 USP17L21D6R901 530 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 PRDX5P30044 214 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 TRIM65Q6PJ69 517 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 PIK3AP1Q6ZUJ8 805 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 RAD21O60216 631 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 CYP19A1P11511 503 aaPredicted RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 GDAQ9Y2T3 454 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 LMO7Q8WWI1 1683 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 MAP3K15Q6ZN16 1313 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 NWD2Q9ULI1 1742 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 TCRBV5S4A2TA0A5A2 114 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 DHX16O60231 1041 aaKnown RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 SRGAP2O75044 1071 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 N4BP1O75113 896 aaKnown RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 EVCP57679 992 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 VGLL2Q8N8G2 317 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 CCDC12Q8WUD4 166 aaPredicted RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 SRP68Q9UHB9 627 aaKnown RBP12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 ZMYM6O95789 1325 aa12.07□□□□□ -0.48
SLC35A3-220ENST00000640360 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 CHRNDQ07001 517 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 POSTNQ15063 836 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 ZNF384Q8TF68 577 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 UBXN4Q92575 508 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
SLC35A3-220ENST00000640360 HDAC6Q9UBN7 1215 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms