RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 BTBD19C9JJ37 291 aa21.48■■□□□ 1.03
PTPN11-207ENST00000639857 GOLIM4O00461 696 aa21.48■■□□□ 1.03
PTPN11-207ENST00000639857 AAMPQ13685 434 aa21.48■■□□□ 1.03
PTPN11-207ENST00000639857 FOXP4Q8IVH2 680 aaPredicted RBP21.48■■□□□ 1.03
PTPN11-207ENST00000639857 PAG1Q9NWQ8 432 aa21.48■■□□□ 1.03
PTPN11-207ENST00000639857 LOC285556D6RIA3 1793 aa21.48■■□□□ 1.03
PTPN11-207ENST00000639857 PDE6AP16499 860 aa21.47■■□□□ 1.03
PTPN11-207ENST00000639857 SLC9C2Q5TAH2 1124 aa21.47■■□□□ 1.03
PTPN11-207ENST00000639857 MAPKAPK5Q8IW41 473 aa21.47■■□□□ 1.03
PTPN11-207ENST00000639857 MIGA1Q8NAN2 632 aa21.47■■□□□ 1.03
PTPN11-207ENST00000639857 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTPN11-207ENST00000639857 AFG3L2Q9Y4W6 797 aa21.47■■□□□ 1.03
PTPN11-207ENST00000639857 ZHX2Q9Y6X8 837 aa21.47■■□□□ 1.03
PTPN11-207ENST00000639857 A0A0G2JLL6 359 aaPredicted RBP21.46■■□□□ 1.03
PTPN11-207ENST00000639857 TLR2O60603 784 aa21.46■■□□□ 1.03
PTPN11-207ENST00000639857 HLA-DOAP06340 250 aa21.46■■□□□ 1.03
PTPN11-207ENST00000639857 DYNLL1P63167 89 aaKnown RBP21.46■■□□□ 1.03
PTPN11-207ENST00000639857 SP3Q02447 781 aa21.46■■□□□ 1.03
PTPN11-207ENST00000639857 FASTKD5Q7L8L6 764 aaKnown RBP21.46■■□□□ 1.03
PTPN11-207ENST00000639857 PRRT2Q7Z6L0 340 aaPredicted RBP21.46■■□□□ 1.03
PTPN11-207ENST00000639857 GPATCH3Q96I76 525 aa21.46■■□□□ 1.03
PTPN11-207ENST00000639857 RIOK1Q9BRS2 568 aaKnown RBP21.46■■□□□ 1.03
PTPN11-207ENST00000639857 GINM1Q9NU53 330 aa21.46■■□□□ 1.03
PTPN11-207ENST00000639857 PCDHB15Q9Y5E8 787 aa21.46■■□□□ 1.03
PTPN11-207ENST00000639857 MAGEB6P1A0A0J9YX57 407 aa21.45■■□□□ 1.02
PTPN11-207ENST00000639857 CAP2P40123 477 aa21.45■■□□□ 1.02
PTPN11-207ENST00000639857 USP5P45974 858 aa21.45■■□□□ 1.02
PTPN11-207ENST00000639857 MOGSQ13724 837 aa21.45■■□□□ 1.02
PTPN11-207ENST00000639857 FBXO46Q6PJ61 603 aaPredicted RBP21.45■■□□□ 1.02
PTPN11-207ENST00000639857 BOLA2Q9H3K6 86 aa21.45■■□□□ 1.02
PTPN11-207ENST00000639857 ECHDC1Q9NTX5 307 aa21.45■■□□□ 1.02
PTPN11-207ENST00000639857 TCRBV5S4A2TA0A5A2 114 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 FAM196BA6NMK8 535 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 SMARCA5O60264 1052 aaPredicted RBP21.44■■□□□ 1.02
PTPN11-207ENST00000639857 ARHGEF6Q15052 776 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 CRACR2BQ8N4Y2 399 aaPredicted RBP21.44■■□□□ 1.02
PTPN11-207ENST00000639857 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 EHD4Q9H223 541 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 PALD1Q9ULE6 856 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 SLC45A1Q9Y2W3 748 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 ZNF532Q9HCE3 1301 aa21.44■■□□□ 1.02
PTPN11-207ENST00000639857 CCDC85CA6NKD9 419 aa21.43■■□□□ 1.02
PTPN11-207ENST00000639857 PDHXO00330 501 aa21.43■■□□□ 1.02
PTPN11-207ENST00000639857 ASNSP08243 561 aa21.43■■□□□ 1.02
PTPN11-207ENST00000639857 SLURP2P0DP57 97 aa21.43■■□□□ 1.02
PTPN11-207ENST00000639857 CRBNQ96SW2 442 aa21.43■■□□□ 1.02
PTPN11-207ENST00000639857 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
PTPN11-207ENST00000639857 MYH8P13535 1937 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 ADD2P35612 726 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 UBE3CQ15386 1083 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 ZSCAN25Q6NSZ9 544 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 OTOP1Q7RTM1 612 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 TTC6Q86TZ1 520 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 PARK7Q99497 189 aaKnown RBP21.42■■□□□ 1.02
PTPN11-207ENST00000639857 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 DNAJC18Q9H819 358 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 TAOK2Q9UL54 1235 aa21.42■■□□□ 1.02
PTPN11-207ENST00000639857 ADGRA2Q96PE1 1338 aa21.41■■□□□ 1.02
PTPN11-207ENST00000639857 EDC3Q96F86 508 aaKnown RBP21.41■■□□□ 1.02
PTPN11-207ENST00000639857 AS3MTQ9HBK9 375 aa21.41■■□□□ 1.02
PTPN11-207ENST00000639857 SAP30BPQ9UHR5 308 aaKnown RBP21.41■■□□□ 1.02
PTPN11-207ENST00000639857 HPS5Q9UPZ3 1129 aa21.41■■□□□ 1.02
PTPN11-207ENST00000639857 TRIM17Q9Y577 477 aa21.41■■□□□ 1.02
PTPN11-207ENST00000639857 TTC41PQ6P2S7 1318 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 USP17L5A8MUK1 530 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 GPAT2Q6NUI2 795 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
PTPN11-207ENST00000639857 ZNF280CQ8ND82 737 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 CD99L2Q8TCZ2 262 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 SERPINB13Q9UIV8 391 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 MGAMO43451 1857 aa21.4■■□□□ 1.02
PTPN11-207ENST00000639857 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.02
PTPN11-207ENST00000639857 TRIM75PA6NK02 468 aa21.39■■□□□ 1.01
PTPN11-207ENST00000639857 GNRH1P01148 92 aa21.39■■□□□ 1.01
PTPN11-207ENST00000639857 HDAC1Q13547 482 aaPredicted RBP21.39■■□□□ 1.01
PTPN11-207ENST00000639857 RRP1BQ14684 758 aaKnown RBP21.39■■□□□ 1.01
PTPN11-207ENST00000639857 C17orf99Q6UX52 265 aa21.39■■□□□ 1.01
PTPN11-207ENST00000639857 WDR18Q9BV38 432 aa21.39■■□□□ 1.01
PTPN11-207ENST00000639857 EFCC1Q9HA90 598 aa21.39■■□□□ 1.01
PTPN11-207ENST00000639857 KIF22Q14807 665 aa21.38■■□□□ 1.01
PTPN11-207ENST00000639857 TATDN1Q6P1N9 297 aa21.38■■□□□ 1.01
PTPN11-207ENST00000639857 GCC1Q96CN9 775 aa21.38■■□□□ 1.01
PTPN11-207ENST00000639857 AGTPBP1Q9UPW5 1226 aa21.38■■□□□ 1.01
PTPN11-207ENST00000639857 ERC2O15083 957 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 LACTBP83111 547 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-207ENST00000639857 SPP2Q13103 211 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 SH3D19Q5HYK7 790 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 GADL1Q6ZQY3 521 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 LCORLQ8N3X6 602 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 ATP8A2Q9NTI2 1148 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-207ENST00000639857 PTPN22Q9Y2R2 807 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 RBBP6Q7Z6E9 1792 aaKnown RBP21.37■■□□□ 1.01
PTPN11-207ENST00000639857 HTTP42858 3142 aa21.37■■□□□ 1.01
PTPN11-207ENST00000639857 ZSWIM8A7E2V4 1837 aa21.36■■□□□ 1.01
PTPN11-207ENST00000639857 RGS19P49795 217 aa21.36■■□□□ 1.01
PTPN11-207ENST00000639857 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
PTPN11-207ENST00000639857 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
PTPN11-207ENST00000639857 PNMA3Q9UL41 463 aa21.36■■□□□ 1.01
PTPN11-207ENST00000639857 ZBTB21Q9ULJ3 1066 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms