RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PDE4DQ08499 809 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 OSBP2Q969R2 916 aa16.28■□□□□ 0.2
SCARB2-216ENST00000639300 CCDC94Q9BW85 323 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-216ENST00000639300 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
SCARB2-216ENST00000639300 OGFOD1Q8N543 542 aa16.27■□□□□ 0.2
SCARB2-216ENST00000639300 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
SCARB2-216ENST00000639300 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
SCARB2-216ENST00000639300 FAM107BQ9H098 131 aa16.27■□□□□ 0.2
SCARB2-216ENST00000639300 BLZF1Q9H2G9 400 aa16.27■□□□□ 0.2
SCARB2-216ENST00000639300 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-216ENST00000639300 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 STXBP4Q6ZWJ1 553 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 MAATS1Q7Z4T9 603 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 FANCBQ8NB91 859 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 NSUN7Q8NE18 718 aaKnown RBP16.27■□□□□ 0.19
SCARB2-216ENST00000639300 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 PNPLA6Q8IY17 1366 aa16.27■□□□□ 0.19
SCARB2-216ENST00000639300 CETN2P41208 172 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-216ENST00000639300 VEZTQ9HBM0 779 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 CALCOCO1Q9P1Z2 691 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 LMTK3Q96Q04 1460 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
SCARB2-216ENST00000639300 ARHGAP31Q2M1Z3 1444 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 MAP3K15Q6ZN16 1313 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 BICDL2A1A5D9 508 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 TRAF5O00463 557 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 NOSTRINQ8IVI9 506 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 DYDC1Q8WWB3 177 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
SCARB2-216ENST00000639300 CEP112Q8N8E3 955 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 TGFBRAP1Q8WUH2 860 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 A2ML1A8K2U0 1454 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 ZNF500O60304 480 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-216ENST00000639300 KRT9P35527 623 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 CKAP4Q07065 602 aaKnown RBP16.26■□□□□ 0.19
SCARB2-216ENST00000639300 ELF2Q15723 593 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 ERO1AQ96HE7 468 aa16.26■□□□□ 0.19
SCARB2-216ENST00000639300 TNKSO95271 1327 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 CYP27B1O15528 508 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 LONRF3Q496Y0 759 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 CCNT1O60563 726 aaKnown RBP16.25■□□□□ 0.19
SCARB2-216ENST00000639300 CSGALNACT2Q8N6G5 542 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 NEK11Q8NG66 645 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 WDR66Q8TBY9 1149 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 SYNRGQ9UMZ2 1314 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 ADKP55263 362 aaKnown RBP16.25■□□□□ 0.19
SCARB2-216ENST00000639300 KCNQ4P56696 695 aa16.25■□□□□ 0.19
SCARB2-216ENST00000639300 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-216ENST00000639300 PLCD1P51178 756 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 PYCARDQ9ULZ3 195 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 UNC13BO14795 1591 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 NOC4LQ9BVI4 516 aaKnown RBP16.24■□□□□ 0.19
SCARB2-216ENST00000639300 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
SCARB2-216ENST00000639300 M0R2C6 588 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
SCARB2-216ENST00000639300 PPP2R3AQ06190 1150 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 KIF2CQ99661 725 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 CMA1P23946 247 aa16.24■□□□□ 0.19
SCARB2-216ENST00000639300 CHRNDQ07001 517 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 PLS1Q14651 629 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 SCLT1Q96NL6 688 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 CFAP74Q9C0B2 1584 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 RBM26Q5T8P6 1007 aaKnown RBP16.23■□□□□ 0.19
SCARB2-216ENST00000639300 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 GGA1Q9UJY5 639 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 SNAP23O00161 211 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 PAK1Q13153 545 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 UBE3CQ15386 1083 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 DYMQ7RTS9 669 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 EEF2KMTQ96G04 330 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 ARHGAP6O43182 974 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 SIK1P57059 783 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 PPP2R5BQ15173 497 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 GPR108Q9NPR9 543 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
SCARB2-216ENST00000639300 RAD51AP2Q09MP3 1159 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 BCL2L12Q9HB09 334 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-216ENST00000639300 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 GJB4Q9NTQ9 266 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 ZMYM6O95789 1325 aa16.22■□□□□ 0.19
SCARB2-216ENST00000639300 GLI2P10070 1586 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 PRKAB2O43741 272 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
SCARB2-216ENST00000639300 ZBTB21Q9ULJ3 1066 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms