RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 PLEKHA8P1O95397 391 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 TYRO3Q06418 890 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 ANO6Q4KMQ2 910 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 SPECC1Q5M775 1068 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 SGMS1Q86VZ5 419 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 COL23A1Q86Y22 540 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 MAPKAPK5Q8IW41 473 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 TGFBRAP1Q8WUH2 860 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 RCOR1Q9UKL0 485 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 XDHP47989 1333 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 BTBD18B2RXH4 712 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 LIFRP42702 1097 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 USP5P45974 858 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 SSRP1Q08945 709 aaKnown RBP9.17□□□□□ -0.94
GABRB3-225ENST00000638099 NR5A1Q13285 461 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 SART3Q15020 963 aaKnown RBP9.17□□□□□ -0.94
GABRB3-225ENST00000638099 RASGRP2Q7LDG7 609 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 ZNF396Q96N95 335 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-225ENST00000638099 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 DNAJC25Q9H1X3 360 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 WDR19Q8NEZ3 1342 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 ECM29Q5VYK3 1845 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 PTMAP06454 111 aaKnown RBP9.17□□□□□ -0.94
GABRB3-225ENST00000638099 VEGFAP15692 232 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-225ENST00000638099 ISM2Q6H9L7 571 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 ESR2Q92731 530 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 CRNKL1Q9BZJ0 848 aaKnown RBP9.17□□□□□ -0.94
GABRB3-225ENST00000638099 CLSTN2Q9H4D0 955 aa9.17□□□□□ -0.94
GABRB3-225ENST00000638099 ADCY5O95622 1261 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 NDUFA8P51970 172 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 SEC23AQ15436 765 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 IFIT1BQ5T764 474 aaKnown RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 CPLX2Q6PUV4 134 aaKnown RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 FANCBQ8NB91 859 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 SPC24Q8NBT2 197 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 ZSCAN10Q96SZ4 725 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 RNF41Q9H4P4 317 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 CD209Q9NNX6 404 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 GGA1Q9UJY5 639 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 WDHD1O75717 1129 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 CCDC192P0DO97 292 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 SNW1Q13573 536 aaKnown RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 TDRD7Q8NHU6 1098 aaKnown RBP9.16□□□□□ -0.94
GABRB3-225ENST00000638099 PDLIM2Q96JY6 352 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 VPS54Q9P1Q0 977 aa9.16□□□□□ -0.94
GABRB3-225ENST00000638099 USP17L3A6NCW0 530 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 USP17L4A6NCW7 530 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 BIN1O00499 593 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 SPTLC2O15270 562 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 CDKL5O76039 1030 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 PLCD1P51178 756 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 MFSD14BQ5SR56 506 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 ANO1Q5XXA6 986 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 CCDC73Q6ZRK6 1079 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 USP17L1Q7RTZ2 530 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 ZNF804AQ7Z570 1209 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 TBC1D16Q8TBP0 767 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 RBM17Q96I25 401 aaKnown RBP9.15□□□□□ -0.94
GABRB3-225ENST00000638099 BRIP1Q9BX63 1249 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
GABRB3-225ENST00000638099 TSPY2A6NKD2 308 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 ADAMTS3O15072 1205 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.95
GABRB3-225ENST00000638099 MMP10P09238 476 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 GTF2IP78347 998 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 GRIN1Q05586 938 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 TRIM29Q14134 588 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 CRY2Q49AN0 593 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 C11orf57Q6ZUT1 292 aaPredicted RBP9.15□□□□□ -0.95
GABRB3-225ENST00000638099 NBPF11Q86T75 865 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 RTEL1Q9NZ71 1219 aa9.15□□□□□ -0.95
GABRB3-225ENST00000638099 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.15□□□□□ -0.95
GABRB3-225ENST00000638099 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.95
GABRB3-225ENST00000638099 CCDC88AQ3V6T2 1871 aa9.14□□□□□ -0.95
GABRB3-225ENST00000638099 SEMA3EO15041 775 aa9.14□□□□□ -0.95
GABRB3-225ENST00000638099 FMNL1O95466 1100 aaPredicted RBP9.14□□□□□ -0.95
GABRB3-225ENST00000638099 DIS3L2Q8IYB7 885 aaKnown RBP9.14□□□□□ -0.95
GABRB3-225ENST00000638099 C17orf53Q8N3J3 647 aaPredicted RBP9.14□□□□□ -0.95
GABRB3-225ENST00000638099 CRACR2BQ8N4Y2 399 aaPredicted RBP9.14□□□□□ -0.95
GABRB3-225ENST00000638099 ZNF622Q969S3 477 aaKnown RBP eCLIP9.14□□□□□ -0.95
GABRB3-225ENST00000638099 CPVLQ9H3G5 476 aa9.14□□□□□ -0.95
GABRB3-225ENST00000638099 CBX8Q9HC52 389 aa9.14□□□□□ -0.95
GABRB3-225ENST00000638099 DDX19AQ9NUU7 478 aaKnown RBP9.14□□□□□ -0.95
GABRB3-225ENST00000638099 TIAM2Q8IVF5 1701 aa9.14□□□□□ -0.95
GABRB3-225ENST00000638099 KINO60870 393 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms