RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 NEDD9Q14511 834 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 TRAPPC3LQ5T215 181 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 MRPS27Q92552 414 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 PYM1Q9BRP8 204 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 CALCOCO1Q9P1Z2 691 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 TBC1D8O95759 1140 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 MMS19Q96T76 1030 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 TSR3Q9UJK0 312 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 CALML3P27482 149 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 KLHDC4Q8TBB5 520 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 KIAA1524Q8TCG1 905 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 CASQ2O14958 399 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 ADAT2Q7Z6V5 191 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 ATICP31939 592 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 SKIV2LQ15477 1246 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 ZBTB41Q5SVQ8 909 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 SYNDIG1Q9H7V2 258 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 AATFQ9NY61 560 aaKnown RBP eCLIP18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 PCK1P35558 622 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 VPS16Q9H269 839 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 B4E1Z4 1266 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 DTHD1Q6ZMT9 781 aa18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 TACO1Q9BSH4 297 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-253ENST00000637927 RNF113AO15541 343 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 RBBP5Q15291 538 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 RPS6KA2Q15349 733 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 DYMQ7RTS9 669 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 TSPYL6Q8N831 410 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 UBN2Q6ZU65 1347 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 CD19P15391 556 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 AK2P54819 239 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 ANO4Q32M45 955 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 AKAP4Q5JQC9 854 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 MSANTD4Q8NCY6 345 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 KCNG4Q8TDN1 519 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 POTEB2H3BUK9 544 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 ZNF467Q7Z7K2 595 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 STIM2Q9P246 746 aa18.93■□□□□ 0.62
CACNA1A-253ENST00000637927 ARHGAP44Q17R89 818 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 TEX11Q8IYF3 940 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 KSR2Q6VAB6 950 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 SAMD15Q9P1V8 674 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 TRIM75PA6NK02 468 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 TRAF5O00463 557 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 TNFAIP3P21580 790 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 CTAGE1Q96RT6 745 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 MTRQ99707 1265 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 CTDSPL2Q05D32 466 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 CREB3L3Q68CJ9 461 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 SPTLC2O15270 562 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 SZRD1Q7Z422 152 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 CCDC42Q96M95 316 aa18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 XAB2Q9HCS7 855 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-253ENST00000637927 NELFCDQ8IXH7 590 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 MCUQ8NE86 351 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 RTL9Q8NET4 1388 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 IL15P40933 162 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 IFT74Q96LB3 600 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 KAZNQ674X7 775 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 KLHL7Q8IXQ5 586 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 IFNKQ9P0W0 207 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 A0A1B0GVL5 298 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 FAM98CQ17RN3 349 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 HS2ST1Q7LGA3 356 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 GSTA1P08263 222 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 GSTA2P09210 222 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 FAM193BQ96PV7 902 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 BUB1BO60566 1050 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 PIK3AP1Q6ZUJ8 805 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 TMTC2Q8N394 836 aa18.91■□□□□ 0.62
CACNA1A-253ENST00000637927 TXKP42681 527 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 SESN3P58005 492 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 TIMM10P62072 90 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 CCDC125Q86Z20 511 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 ANKRD42Q8N9B4 389 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 PDZD8Q8NEN9 1154 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 SPDL1Q96EA4 605 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 CDCA7Q9BWT1 371 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 POLIQ9UNA4 740 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 FANCAO15360 1455 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 TNRQ92752 1358 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 NUCKS1Q9H1E3 243 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 SPDYE1Q8NFV5 336 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 ZFYP08048 801 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 EPB41P11171 864 aaKnown RBP18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 TRIM68Q6AZZ1 485 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 WDR66Q8TBY9 1149 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 A0A1B0GUL7 405 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 F13A1P00488 732 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 ARHGAP27Q6ZUM4 889 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
CACNA1A-253ENST00000637927 PRDM1O75626 825 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms