RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MAP3K10Q02779 954 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 PTH1RQ03431 593 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 EVX2Q03828 476 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 COL13A1Q5TAT6 717 aaPredicted RBP19.09■□□□□ 0.65
CLN6-216ENST00000636876 MIGA2Q7L4E1 593 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 METTL16Q86W50 562 aaKnown RBP19.09■□□□□ 0.65
CLN6-216ENST00000636876 FOXP4Q8IVH2 680 aaPredicted RBP19.09■□□□□ 0.65
CLN6-216ENST00000636876 GBA2Q9HCG7 927 aaPredicted RBP19.09■□□□□ 0.65
CLN6-216ENST00000636876 HERC5Q9UII4 1024 aaKnown RBP19.09■□□□□ 0.65
CLN6-216ENST00000636876 PAPPA2Q9BXP8 1791 aa19.09■□□□□ 0.65
CLN6-216ENST00000636876 SLURP2P0DP57 97 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 FKBP1BP68106 108 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 PRKG1Q13976 671 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 CRACR2BQ8N4Y2 399 aaPredicted RBP19.08■□□□□ 0.64
CLN6-216ENST00000636876 C2orf69Q8N8R5 385 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 ZNF341Q9BYN7 854 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 SERPINB13Q9UIV8 391 aa19.08■□□□□ 0.64
CLN6-216ENST00000636876 LAMB1P07942 1786 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 FAM196BA6NMK8 535 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 MINDY4BA8MYZ0 360 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 SMIM22K7EJ46 135 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 USP2O75604 605 aaPredicted RBP19.07■□□□□ 0.64
CLN6-216ENST00000636876 GABPAQ06546 454 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 TTLL12Q14166 644 aaPredicted RBP19.07■□□□□ 0.64
CLN6-216ENST00000636876 ARMC9Q7Z3E5 817 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 LSG1Q9H089 658 aaKnown RBP19.07■□□□□ 0.64
CLN6-216ENST00000636876 DNAJC18Q9H819 358 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.07■□□□□ 0.64
CLN6-216ENST00000636876 ANO2Q9NQ90 1003 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 TAOK2Q9UL54 1235 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 FZD1Q9UP38 647 aa19.07■□□□□ 0.64
CLN6-216ENST00000636876 TMEM88BA6NKF7 163 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 MAP3K11Q16584 847 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 MOB2Q70IA6 237 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 MAP4K1Q92918 833 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 TRIM34Q9BYJ4 488 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 CTNNA3Q9UI47 895 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 ANGEL1Q9UNK9 670 aaKnown RBP19.06■□□□□ 0.64
CLN6-216ENST00000636876 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
CLN6-216ENST00000636876 ROBO3Q96MS0 1386 aa19.06■□□□□ 0.64
CLN6-216ENST00000636876 IREB2P48200 963 aaKnown RBP19.05■□□□□ 0.64
CLN6-216ENST00000636876 PPARAQ07869 468 aa19.05■□□□□ 0.64
CLN6-216ENST00000636876 DYNLL2Q96FJ2 89 aa19.05■□□□□ 0.64
CLN6-216ENST00000636876 ZNF112Q9UJU3 913 aa19.05■□□□□ 0.64
CLN6-216ENST00000636876 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
CLN6-216ENST00000636876 PHF20L1A8MW92 1017 aa19.04■□□□□ 0.64
CLN6-216ENST00000636876 UBE2Q2LH0YL09 131 aa19.04■□□□□ 0.64
CLN6-216ENST00000636876 C16orf86Q6ZW13 317 aa19.04■□□□□ 0.64
CLN6-216ENST00000636876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.04■□□□□ 0.64
CLN6-216ENST00000636876 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
CLN6-216ENST00000636876 SWAP70Q9UH65 585 aa19.04■□□□□ 0.64
CLN6-216ENST00000636876 LAMA4Q16363 1823 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 REC8O95072 547 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 HSPA1AP0DMV8 641 aaKnown RBP19.03■□□□□ 0.64
CLN6-216ENST00000636876 HSPA1BP0DMV9 641 aaKnown RBP19.03■□□□□ 0.64
CLN6-216ENST00000636876 SHMT1P34896 483 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 HAND2P61296 217 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 LDLRAD1Q5T700 205 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 SLC44A5Q8NCS7 719 aa19.03■□□□□ 0.64
CLN6-216ENST00000636876 RBM8AQ9Y5S9 174 aaKnown RBP19.03■□□□□ 0.64
CLN6-216ENST00000636876 ZNF213O14771 459 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 SLC3A2P08195 630 aaKnown RBP19.02■□□□□ 0.64
CLN6-216ENST00000636876 INPP5BP32019 993 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 CDK8P49336 464 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 HUNKP57058 714 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 CTDSPL2Q05D32 466 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 IMMTQ16891 758 aaKnown RBP19.02■□□□□ 0.64
CLN6-216ENST00000636876 C8orf34Q49A92 452 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 TATDN1Q6P1N9 297 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 SAPCD2Q86UD0 394 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 CREBZFQ9NS37 354 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 TLL2Q9Y6L7 1015 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 OTOFQ9HC10 1997 aa19.02■□□□□ 0.64
CLN6-216ENST00000636876 UNCXA6NJT0 531 aa19.01■□□□□ 0.63
CLN6-216ENST00000636876 RRP1BQ14684 758 aaKnown RBP19.01■□□□□ 0.63
CLN6-216ENST00000636876 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
CLN6-216ENST00000636876 ANKRD13AQ8IZ07 590 aa19.01■□□□□ 0.63
CLN6-216ENST00000636876 STK11IPQ8N1F8 1099 aa19.01■□□□□ 0.63
CLN6-216ENST00000636876 NBPF3Q9H094 633 aa19.01■□□□□ 0.63
CLN6-216ENST00000636876 ABT1Q9ULW3 272 aaKnown RBP19.01■□□□□ 0.63
CLN6-216ENST00000636876 CTNND1O60716 968 aaKnown RBP19■□□□□ 0.63
CLN6-216ENST00000636876 CAP2P40123 477 aa19■□□□□ 0.63
CLN6-216ENST00000636876 PDE4BQ07343 736 aa19■□□□□ 0.63
CLN6-216ENST00000636876 VGLL4Q14135 290 aa19■□□□□ 0.63
CLN6-216ENST00000636876 NOL9Q5SY16 702 aaKnown RBP19■□□□□ 0.63
CLN6-216ENST00000636876 TBC1D10CQ8IV04 446 aa19■□□□□ 0.63
CLN6-216ENST00000636876 ZKSCAN4Q969J2 545 aaPredicted RBP19■□□□□ 0.63
CLN6-216ENST00000636876 ZNF287Q9HBT7 754 aa19■□□□□ 0.63
CLN6-216ENST00000636876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19■□□□□ 0.63
CLN6-216ENST00000636876 CSADQ9Y600 493 aa19■□□□□ 0.63
CLN6-216ENST00000636876 EIF5BO60841 1220 aaKnown RBP18.99■□□□□ 0.63
CLN6-216ENST00000636876 CYP21A2P08686 494 aa18.99■□□□□ 0.63
CLN6-216ENST00000636876 CERKLQ49MI3 558 aaPredicted RBP18.99■□□□□ 0.63
CLN6-216ENST00000636876 CLMNQ96JQ2 1002 aa18.99■□□□□ 0.63
CLN6-216ENST00000636876 MKNK2Q9HBH9 465 aa18.99■□□□□ 0.63
CLN6-216ENST00000636876 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
CLN6-216ENST00000636876 SNCAIPQ9Y6H5 919 aa18.99■□□□□ 0.63
CLN6-216ENST00000636876 MYH8P13535 1937 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms