RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ATRNL1Q5VV63 1379 aa9.86□□□□□ -0.83
PNKP-226ENST00000636840 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
PNKP-226ENST00000636840 PATL2C9JE40 543 aaKnown RBP9.85□□□□□ -0.83
PNKP-226ENST00000636840 ALDH1A1P00352 501 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 INPP5BP32019 993 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 GTF2A2P52657 109 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
PNKP-226ENST00000636840 VGLL4Q14135 290 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 ZMYM1Q5SVZ6 1142 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 SCYL3Q8IZE3 742 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 LCORLQ8N3X6 602 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 OSBP2Q969R2 916 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 OPTNQ96CV9 577 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 WNK4Q96J92 1243 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 CLMNQ96JQ2 1002 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 TBC1D2Q9BYX2 928 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 ZNF287Q9HBT7 754 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 DCP1AQ9NPI6 582 aaPredicted RBP9.85□□□□□ -0.83
PNKP-226ENST00000636840 DIAPH3Q9NSV4 1193 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 SERPINB13Q9UIV8 391 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 CEP350Q5VT06 3117 aa9.85□□□□□ -0.83
PNKP-226ENST00000636840 COL2A1P02458 1487 aaPredicted RBP9.85□□□□□ -0.83
PNKP-226ENST00000636840 SPDYE5A6NIY4 337 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 GPAA1O43292 621 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 SLC3A2P08195 630 aaKnown RBP9.84□□□□□ -0.83
PNKP-226ENST00000636840 ASNSP08243 561 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 CETPP11597 493 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 TM4SF4P48230 202 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 SNAPC2Q13487 334 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 MCMDC2Q4G0Z9 681 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 NOL9Q5SY16 702 aaKnown RBP9.84□□□□□ -0.83
PNKP-226ENST00000636840 SDR42E1Q8WUS8 393 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 OTUD5Q96G74 571 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 EHD4Q9H223 541 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 AS3MTQ9HBK9 375 aa9.84□□□□□ -0.83
PNKP-226ENST00000636840 MYO5AQ9Y4I1 1855 aaKnown RBP9.84□□□□□ -0.83
PNKP-226ENST00000636840 USP17L5A8MUK1 530 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 USP17L21D6R901 530 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 CXCL11O14625 94 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 PRKAB2O43741 272 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 HSPA1AP0DMV8 641 aaKnown RBP9.83□□□□□ -0.84
PNKP-226ENST00000636840 HSPA1BP0DMV9 641 aaKnown RBP9.83□□□□□ -0.84
PNKP-226ENST00000636840 SDSP20132 328 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 CAP2P40123 477 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 TDO2P48775 406 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 CTCFP49711 727 aaPredicted RBP9.83□□□□□ -0.84
PNKP-226ENST00000636840 PPIL2Q13356 520 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 SLFNL1Q499Z3 407 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 CERKLQ49MI3 558 aaPredicted RBP9.83□□□□□ -0.84
PNKP-226ENST00000636840 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 METTL16Q86W50 562 aaKnown RBP9.83□□□□□ -0.84
PNKP-226ENST00000636840 RUFY2Q8WXA3 655 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 NAPBQ9H115 298 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 ARPP21Q9UBL0 812 aaPredicted RBP9.83□□□□□ -0.84
PNKP-226ENST00000636840 SWAP70Q9UH65 585 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 SNCAIPQ9Y6H5 919 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 ZHX2Q9Y6X8 837 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 RFX7Q2KHR2 1363 aa9.83□□□□□ -0.84
PNKP-226ENST00000636840 MINDY4BA8MYZ0 360 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 TRPA1O75762 1119 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 PTPRAP18433 802 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 PDE4AP27815 886 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 PLCD1P51178 756 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 SLC4A8Q2Y0W8 1093 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 SBK1Q52WX2 424 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 C12orf60Q5U649 245 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 FASTKD5Q7L8L6 764 aaKnown RBP9.82□□□□□ -0.84
PNKP-226ENST00000636840 IFNL3Q8IZI9 196 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 CCDC17Q96LX7 622 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 MKNK2Q9HBH9 465 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 SAGE1Q9NXZ1 904 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 SSC5DA1L4H1 1573 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 MAST2Q6P0Q8 1798 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 DOCK2Q92608 1830 aa9.82□□□□□ -0.84
PNKP-226ENST00000636840 CCL15-CCL14A0A0B4J2E2 113 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 FAM196BA6NMK8 535 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 GSG1L2A8MUP6 293 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 IRF6O14896 467 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 NMIQ13287 307 aaPredicted RBP9.81□□□□□ -0.84
PNKP-226ENST00000636840 CCL15Q16663 113 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 ABCB5Q2M3G0 1257 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 TATDN1Q6P1N9 297 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 CTR9Q6PD62 1173 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 CWC27Q6UX04 472 aaKnown RBP9.81□□□□□ -0.84
PNKP-226ENST00000636840 ZNF444Q8N0Y2 327 aaPredicted RBP9.81□□□□□ -0.84
PNKP-226ENST00000636840 ZIC5Q96T25 663 aa9.81□□□□□ -0.84
PNKP-226ENST00000636840 SEC62Q99442 399 aaKnown RBP9.81□□□□□ -0.84
PNKP-226ENST00000636840 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
PNKP-226ENST00000636840 C19orf81C9J6K1 198 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 M0R2C6 588 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 MPHOSPH10O00566 681 aaKnown RBP9.8□□□□□ -0.84
PNKP-226ENST00000636840 CHGBP05060 677 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 PDE4BQ07343 736 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
PNKP-226ENST00000636840 ALX1Q15699 326 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 CASC1Q6TDU7 716 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms