RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MFSD14BQ5SR56 506 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 DACT2Q5SW24 774 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 TTLL5Q6EMB2 1281 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
UPF3B-205ENST00000636792 KBTBD3Q8NAB2 608 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 DBNDD1Q9H9R9 158 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 PAG1Q9NWQ8 432 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 GMPR2Q9P2T1 348 aaKnown RBP8.13□□□□□ -1.11
UPF3B-205ENST00000636792 HDAC9Q9UKV0 1011 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 CDK5RAP2Q96SN8 1893 aa8.13□□□□□ -1.11
UPF3B-205ENST00000636792 YDJCA8MPS7 323 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 LDHBP07195 334 aaKnown RBP8.12□□□□□ -1.11
UPF3B-205ENST00000636792 LDHCP07864 332 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 ZAP70P43403 619 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 GTF2IP78347 998 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 C9orf131Q5VYM1 1079 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 OGFOD1Q8N543 542 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 GPR101Q96P66 508 aaPredicted RBP8.12□□□□□ -1.11
UPF3B-205ENST00000636792 BOLA2Q9H3K6 86 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 DACH1Q9UI36 760 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 LAMB1P07942 1786 aa8.12□□□□□ -1.11
UPF3B-205ENST00000636792 COL2A1P02458 1487 aaPredicted RBP8.12□□□□□ -1.11
UPF3B-205ENST00000636792 DDX60LQ5H9U9 1706 aaKnown RBP8.12□□□□□ -1.11
UPF3B-205ENST00000636792 GAKO14976 1311 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 GLTPD2A6NH11 291 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 PSMD14O00487 310 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 OATP04181 439 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
UPF3B-205ENST00000636792 PRELPP51888 382 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 MFAP1P55081 439 aaKnown RBP8.11□□□□□ -1.11
UPF3B-205ENST00000636792 CXCL9Q07325 125 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 SCARF1Q14162 830 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 UBE3CQ15386 1083 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 CASC1Q6TDU7 716 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
UPF3B-205ENST00000636792 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
UPF3B-205ENST00000636792 OTUD7AQ8TE49 926 aaPredicted RBP8.11□□□□□ -1.11
UPF3B-205ENST00000636792 GMLQ99445 158 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 DNAJC2Q99543 621 aaKnown RBP8.11□□□□□ -1.11
UPF3B-205ENST00000636792 LRP2BPQ9P2M1 347 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 NAV1Q8NEY1 1877 aa8.11□□□□□ -1.11
UPF3B-205ENST00000636792 RPAP1Q9BWH6 1393 aaPredicted RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 ZNF541Q9H0D2 1346 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 WTIPA6NIX2 430 aaPredicted RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 GOLIM4O00461 696 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 EPB41L2O43491 1005 aaKnown RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 GSPT1P15170 499 aaKnown RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 ADD2P35612 726 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 ZNF280AP59817 542 aaPredicted RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 PUS10Q3MIT2 529 aaKnown RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 RUFY2Q8WXA3 655 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 APPBP2Q92624 585 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 TEKT1Q969V4 418 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 FSD1Q9BTV5 496 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 ABCF2Q9UG63 623 aa8.1□□□□□ -1.11
UPF3B-205ENST00000636792 FCF1Q9Y324 198 aaKnown RBP8.1□□□□□ -1.11
UPF3B-205ENST00000636792 MROH7-TTC4A0A0A0MT08 1334 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
UPF3B-205ENST00000636792 WIPF1O43516 503 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 IDH1O75874 414 aaKnown RBP8.09□□□□□ -1.11
UPF3B-205ENST00000636792 RAD17O75943 681 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 USP17L8P0C7I0 530 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 GNAT2P19087 354 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 PRDX5P30044 214 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 PI16Q6UXB8 463 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 NSUN4Q96CB9 384 aaKnown RBP8.09□□□□□ -1.11
UPF3B-205ENST00000636792 ZDHHC15Q96MV8 337 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 HELLSQ9NRZ9 838 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 GPRC5DQ9NZD1 345 aa8.09□□□□□ -1.11
UPF3B-205ENST00000636792 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
UPF3B-205ENST00000636792 ZMYM6O95789 1325 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 MYH1P12882 1939 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 H7C1D1 291 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 RNF113AO15541 343 aaKnown RBP8.08□□□□□ -1.12
UPF3B-205ENST00000636792 MYO1BO43795 1136 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 CDC45O75419 566 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 BAG3O95817 575 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 PDE6AP16499 860 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 SDSP20132 328 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 RGS3P49796 1198 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 NT5C2P49902 561 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 SCNN1DP51172 638 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 MECOMQ03112 1051 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 SLC9C2Q5TAH2 1124 aa8.08□□□□□ -1.12
UPF3B-205ENST00000636792 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms