RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 HERC5Q9UII4 1024 aaKnown RBP18.59■□□□□ 0.57
CLN6-211ENST00000635754 PRKAB2O43741 272 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.57
CLN6-211ENST00000635754 GSPT1P15170 499 aaKnown RBP18.58■□□□□ 0.57
CLN6-211ENST00000635754 GNAT2P19087 354 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 MAP3K10Q02779 954 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 NOGQ13253 232 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 VGLL4Q14135 290 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 SLC4A8Q2Y0W8 1093 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.58■□□□□ 0.57
CLN6-211ENST00000635754 TTC6Q86TZ1 520 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 TRIM34Q9BYJ4 488 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.58■□□□□ 0.57
CLN6-211ENST00000635754 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 ZNF112Q9UJU3 913 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 DOCK1Q14185 1865 aa18.58■□□□□ 0.57
CLN6-211ENST00000635754 FAM155AB1AL88 458 aaPredicted RBP18.57■□□□□ 0.56
CLN6-211ENST00000635754 HIP1O00291 1037 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 AMOTL1Q8IY63 956 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 ELP3Q9H9T3 547 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 HELLSQ9NRZ9 838 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 ATAD5Q96QE3 1844 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 AOC2O75106 756 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 SDSP20132 328 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 INPP5BP32019 993 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 MAP2K2P36507 400 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
CLN6-211ENST00000635754 ZKSCAN4Q969J2 545 aaPredicted RBP18.57■□□□□ 0.56
CLN6-211ENST00000635754 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
CLN6-211ENST00000635754 LAMB1P07942 1786 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 A0A0D9SFI3 127 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 PHF20L1A8MW92 1017 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 SLURP2P0DP57 97 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 NMIQ13287 307 aaPredicted RBP18.56■□□□□ 0.56
CLN6-211ENST00000635754 METTL16Q86W50 562 aaKnown RBP18.56■□□□□ 0.56
CLN6-211ENST00000635754 JMYQ8N9B5 988 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 EHD4Q9H223 541 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 SERPINB13Q9UIV8 391 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 SNCAIPQ9Y6H5 919 aa18.56■□□□□ 0.56
CLN6-211ENST00000635754 MYH8P13535 1937 aa18.55■□□□□ 0.56
CLN6-211ENST00000635754 APPP05067 770 aa18.55■□□□□ 0.56
CLN6-211ENST00000635754 ZBTB48P10074 688 aaPredicted RBP18.55■□□□□ 0.56
CLN6-211ENST00000635754 MCMDC2Q4G0Z9 681 aa18.55■□□□□ 0.56
CLN6-211ENST00000635754 NOL9Q5SY16 702 aaKnown RBP18.55■□□□□ 0.56
CLN6-211ENST00000635754 GIMAP6Q6P9H5 292 aa18.55■□□□□ 0.56
CLN6-211ENST00000635754 WNK4Q96J92 1243 aa18.55■□□□□ 0.56
CLN6-211ENST00000635754 GSG1L2A8MUP6 293 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 CTNND1O60716 968 aaKnown RBP18.54■□□□□ 0.56
CLN6-211ENST00000635754 PLCD1P51178 756 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 MKRN3Q13064 507 aaKnown RBP18.54■□□□□ 0.56
CLN6-211ENST00000635754 SPRYD7Q5W111 196 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 SKAP1Q86WV1 359 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 ERO1BQ86YB8 467 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 SCYL3Q8IZE3 742 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 OPTNQ96CV9 577 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 NACAP1Q9BZK3 213 aa18.54■□□□□ 0.56
CLN6-211ENST00000635754 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
CLN6-211ENST00000635754 SPDYE5A6NIY4 337 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 PATL2C9JE40 543 aaKnown RBP18.53■□□□□ 0.56
CLN6-211ENST00000635754 USP17L12C9JPN9 530 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 USP17L21D6R901 530 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 TDO2P48775 406 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
CLN6-211ENST00000635754 KIF23Q02241 960 aaPredicted RBP18.53■□□□□ 0.56
CLN6-211ENST00000635754 OTUD5Q96G74 571 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
CLN6-211ENST00000635754 CYP2D6P10635 497 aa18.52■□□□□ 0.56
CLN6-211ENST00000635754 C12orf60Q5U649 245 aa18.52■□□□□ 0.56
CLN6-211ENST00000635754 CTR9Q6PD62 1173 aa18.52■□□□□ 0.56
CLN6-211ENST00000635754 CWC27Q6UX04 472 aaKnown RBP18.52■□□□□ 0.56
CLN6-211ENST00000635754 CAP2P40123 477 aa18.51■□□□□ 0.55
CLN6-211ENST00000635754 MAP2K1Q02750 393 aaPredicted RBP18.51■□□□□ 0.55
CLN6-211ENST00000635754 REM2Q8IYK8 340 aaPredicted RBP18.51■□□□□ 0.55
CLN6-211ENST00000635754 ZIC5Q96T25 663 aa18.51■□□□□ 0.55
CLN6-211ENST00000635754 EPB41L4AQ9HCS5 686 aaPredicted RBP18.51■□□□□ 0.55
CLN6-211ENST00000635754 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
CLN6-211ENST00000635754 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
CLN6-211ENST00000635754 GJA5P36382 358 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 PPATQ06203 517 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 PPIL2Q13356 520 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 SBK1Q52WX2 424 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 BMP2KLQ5H9B9 411 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
CLN6-211ENST00000635754 IFNL3Q8IZI9 196 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 NAPBQ9H115 298 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 PHIPQ8WWQ0 1821 aa18.5■□□□□ 0.55
CLN6-211ENST00000635754 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 MANSC4A6NHS7 340 aaPredicted RBP18.49■□□□□ 0.55
CLN6-211ENST00000635754 EVX2Q03828 476 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 GABPAQ06546 454 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 SREBF2Q12772 1141 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 TATDN1Q6P1N9 297 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 PCNTO95613 3336 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 MINDY4BA8MYZ0 360 aa18.49■□□□□ 0.55
CLN6-211ENST00000635754 ASNSP08243 561 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms