RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 PDHXO00330 501 aa18.99■□□□□ 0.63
LINC00339-209ENST00000635450 IFIT2P09913 472 aaKnown RBP18.99■□□□□ 0.63
LINC00339-209ENST00000635450 ANKRD23Q86SG2 305 aa18.99■□□□□ 0.63
LINC00339-209ENST00000635450 TEX11Q8IYF3 940 aa18.99■□□□□ 0.63
LINC00339-209ENST00000635450 ZNF512BQ96KM6 892 aaPredicted RBP18.99■□□□□ 0.63
LINC00339-209ENST00000635450 ZCCHC17Q9NP64 241 aaKnown RBP18.99■□□□□ 0.63
LINC00339-209ENST00000635450 ZHX2Q9Y6X8 837 aa18.99■□□□□ 0.63
LINC00339-209ENST00000635450 NAV1Q8NEY1 1877 aa18.99■□□□□ 0.63
LINC00339-209ENST00000635450 LDHCP07864 332 aa18.98■□□□□ 0.63
LINC00339-209ENST00000635450 LACTBP83111 547 aaPredicted RBP18.98■□□□□ 0.63
LINC00339-209ENST00000635450 NAA16Q6N069 864 aaPredicted RBP18.98■□□□□ 0.63
LINC00339-209ENST00000635450 A0A0G2JLL6 359 aaPredicted RBP18.97■□□□□ 0.63
LINC00339-209ENST00000635450 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
LINC00339-209ENST00000635450 CYP2C8P10632 490 aa18.97■□□□□ 0.63
LINC00339-209ENST00000635450 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
LINC00339-209ENST00000635450 C17orf99Q6UX52 265 aa18.97■□□□□ 0.63
LINC00339-209ENST00000635450 PRRT2Q7Z6L0 340 aaPredicted RBP18.97■□□□□ 0.63
LINC00339-209ENST00000635450 LRRCC1Q9C099 1032 aa18.97■□□□□ 0.63
LINC00339-209ENST00000635450 ANTXR1Q9H6X2 564 aa18.97■□□□□ 0.63
LINC00339-209ENST00000635450 PICK1Q9NRD5 415 aa18.97■□□□□ 0.63
LINC00339-209ENST00000635450 AFG3L2Q9Y4W6 797 aa18.97■□□□□ 0.63
LINC00339-209ENST00000635450 DOCK3Q8IZD9 2030 aa18.96■□□□□ 0.63
LINC00339-209ENST00000635450 TRIM75PA6NK02 468 aa18.96■□□□□ 0.63
LINC00339-209ENST00000635450 DYNLL1P63167 89 aaKnown RBP18.96■□□□□ 0.63
LINC00339-209ENST00000635450 MAPKAPK5Q8IW41 473 aa18.96■□□□□ 0.63
LINC00339-209ENST00000635450 ARMC5Q96C12 935 aa18.96■□□□□ 0.63
LINC00339-209ENST00000635450 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
LINC00339-209ENST00000635450 FLT1P17948 1338 aa18.96■□□□□ 0.63
LINC00339-209ENST00000635450 CXCL11O14625 94 aa18.95■□□□□ 0.62
LINC00339-209ENST00000635450 CTNND1O60716 968 aaKnown RBP18.95■□□□□ 0.62
LINC00339-209ENST00000635450 AAMPQ13685 434 aa18.95■□□□□ 0.62
LINC00339-209ENST00000635450 SLC4A8Q2Y0W8 1093 aa18.95■□□□□ 0.62
LINC00339-209ENST00000635450 GADL1Q6ZQY3 521 aa18.95■□□□□ 0.62
LINC00339-209ENST00000635450 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
LINC00339-209ENST00000635450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.95■□□□□ 0.62
LINC00339-209ENST00000635450 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
LINC00339-209ENST00000635450 PCDHB15Q9Y5E8 787 aa18.95■□□□□ 0.62
LINC00339-209ENST00000635450 MYH7P12883 1935 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 TBC1D12O60347 775 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 JAG1P78504 1218 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 MIGA1Q8NAN2 632 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 TGFBRAP1Q8WUH2 860 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 ZNF333Q96JL9 665 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 TRIM47Q96LD4 638 aa18.94■□□□□ 0.62
LINC00339-209ENST00000635450 IGSF3O75054 1194 aa18.93■□□□□ 0.62
LINC00339-209ENST00000635450 IDH1O75874 414 aaKnown RBP18.93■□□□□ 0.62
LINC00339-209ENST00000635450 MYCP01106 439 aaPredicted RBP18.93■□□□□ 0.62
LINC00339-209ENST00000635450 BCRP11274 1271 aa18.93■□□□□ 0.62
LINC00339-209ENST00000635450 PPP4CP60510 307 aa18.93■□□□□ 0.62
LINC00339-209ENST00000635450 TREML2Q5T2D2 321 aa18.93■□□□□ 0.62
LINC00339-209ENST00000635450 SH3TC2Q8TF17 1288 aa18.93■□□□□ 0.62
LINC00339-209ENST00000635450 NOL10Q9BSC4 688 aaKnown RBP18.93■□□□□ 0.62
LINC00339-209ENST00000635450 SAP30BPQ9UHR5 308 aaKnown RBP18.93■□□□□ 0.62
LINC00339-209ENST00000635450 MAP4K4O95819 1239 aaPredicted RBP18.92■□□□□ 0.62
LINC00339-209ENST00000635450 CYP7A1P22680 504 aa18.92■□□□□ 0.62
LINC00339-209ENST00000635450 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
LINC00339-209ENST00000635450 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
LINC00339-209ENST00000635450 SLC9C1Q4G0N8 1177 aa18.91■□□□□ 0.62
LINC00339-209ENST00000635450 MAGEB6Q8N7X4 407 aa18.91■□□□□ 0.62
LINC00339-209ENST00000635450 SMARCA5O60264 1052 aaPredicted RBP18.9■□□□□ 0.62
LINC00339-209ENST00000635450 BAG3O95817 575 aa18.9■□□□□ 0.62
LINC00339-209ENST00000635450 EN2P19622 333 aaPredicted RBP18.9■□□□□ 0.62
LINC00339-209ENST00000635450 OSBPP22059 807 aa18.9■□□□□ 0.62
LINC00339-209ENST00000635450 CAP2P40123 477 aa18.9■□□□□ 0.62
LINC00339-209ENST00000635450 PSMC4P43686 418 aa18.9■□□□□ 0.62
LINC00339-209ENST00000635450 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC00339-209ENST00000635450 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
LINC00339-209ENST00000635450 BAZ2AQ9UIF9 1905 aaKnown RBP18.9■□□□□ 0.62
LINC00339-209ENST00000635450 PLCG2P16885 1265 aa18.89■□□□□ 0.61
LINC00339-209ENST00000635450 SPP2Q13103 211 aa18.89■□□□□ 0.61
LINC00339-209ENST00000635450 KIF22Q14807 665 aa18.89■□□□□ 0.61
LINC00339-209ENST00000635450 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
LINC00339-209ENST00000635450 FASTKD5Q7L8L6 764 aaKnown RBP18.89■□□□□ 0.61
LINC00339-209ENST00000635450 EDC3Q96F86 508 aaKnown RBP18.89■□□□□ 0.61
LINC00339-209ENST00000635450 PLXNB2O15031 1838 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 MYH8P13535 1937 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 GDF11O95390 407 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 HMGCS2P54868 508 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 MAP3K12Q12852 859 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 GPATCH3Q96I76 525 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
LINC00339-209ENST00000635450 PI4KBQ9UBF8 816 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 SRRDQ9UH36 339 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 HERC5Q9UII4 1024 aaKnown RBP18.88■□□□□ 0.61
LINC00339-209ENST00000635450 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
LINC00339-209ENST00000635450 EVX2Q03828 476 aa18.87■□□□□ 0.61
LINC00339-209ENST00000635450 PRKCZQ05513 592 aa18.87■□□□□ 0.61
LINC00339-209ENST00000635450 MYPNQ86TC9 1320 aa18.87■□□□□ 0.61
LINC00339-209ENST00000635450 METTL16Q86W50 562 aaKnown RBP18.87■□□□□ 0.61
LINC00339-209ENST00000635450 ZNF280CQ8ND82 737 aa18.87■□□□□ 0.61
LINC00339-209ENST00000635450 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
LINC00339-209ENST00000635450 GABRQQ9UN88 632 aa18.87■□□□□ 0.61
LINC00339-209ENST00000635450 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
LINC00339-209ENST00000635450 ATP5JP18859 108 aa18.86■□□□□ 0.61
LINC00339-209ENST00000635450 ARHGEF6Q15052 776 aa18.86■□□□□ 0.61
LINC00339-209ENST00000635450 MTFR1Q15390 333 aa18.86■□□□□ 0.61
LINC00339-209ENST00000635450 SLFNL1Q499Z3 407 aa18.86■□□□□ 0.61
LINC00339-209ENST00000635450 TMED8Q6PL24 325 aaPredicted RBP18.86■□□□□ 0.61
LINC00339-209ENST00000635450 RIOK1Q9BRS2 568 aaKnown RBP18.86■□□□□ 0.61
LINC00339-209ENST00000635450 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms