RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 SH3RF3Q8TEJ3 882 aaPredicted RBP12.2□□□□□ -0.46
RHOXF1P3-201ENST00000635058 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
RHOXF1P3-201ENST00000635058 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
RHOXF1P3-201ENST00000635058 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
RHOXF1P3-201ENST00000635058 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 AK9Q5TCS8 1911 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CAP2P40123 477 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CERS3Q8IU89 383 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CRACR2BQ8N4Y2 399 aaPredicted RBP12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TGFBRAP1Q8WUH2 860 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 COA7Q96BR5 231 aa12.19□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TNRC18O15417 2968 aaPredicted RBP12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 LAMB1P07942 1786 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 SLURP2P0DP57 97 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CTGFP29279 349 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 ZAP70P43403 619 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 MAPKAPK5Q8IW41 473 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CCDC8Q9H0W5 538 aaPredicted RBP12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 RNF208Q9H0X6 261 aa12.18□□□□□ -0.46
RHOXF1P3-201ENST00000635058 MYH13Q9UKX3 1938 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 ADCY3O60266 1144 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 IDH1O75874 414 aaKnown RBP12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 ASNSP08243 561 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CAPN2P17655 700 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CYP7A1P22680 504 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PRKCZQ05513 592 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TMED8Q6PL24 325 aaPredicted RBP12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CHMP4BQ9H444 224 aaKnown RBP12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 GINM1Q9NU53 330 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TMOD4Q9NZQ9 345 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
RHOXF1P3-201ENST00000635058 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 COL2A1P02458 1487 aaPredicted RBP12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 GJB1P08034 283 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 RLBP1P12271 317 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CCL5P13501 91 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 FLT3LGP49771 235 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 HMGCS2P54868 508 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 MTFR1Q15390 333 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TREML2Q5T2D2 321 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 CEP85Q6P2H3 762 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 EAF2Q96CJ1 260 aaPredicted RBP12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 DBNLQ9UJU6 430 aaKnown RBP12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PALD1Q9ULE6 856 aa12.16□□□□□ -0.46
RHOXF1P3-201ENST00000635058 MYH2Q9UKX2 1941 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 FLT1P17948 1338 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 HMMRO75330 724 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 USP5P45974 858 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 GJA8P48165 433 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 BACE1P56817 501 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 IRF5Q13568 498 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 FAM110CQ1W6H9 321 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 AACSQ86V21 672 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PXYLP1Q8TE99 480 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 DPF3Q92784 378 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 HTATIP2Q9BUP3 242 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 WDR18Q9BV38 432 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 GABRQQ9UN88 632 aa12.15□□□□□ -0.46
RHOXF1P3-201ENST00000635058 USP17L10C9JJH3 530 aa12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 DYNLL1P63167 89 aaKnown RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 TTF1Q15361 905 aaPredicted RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ADGRA1Q86SQ6 560 aa12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 TTC6Q86TZ1 520 aa12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 RPAP2Q8IXW5 612 aaPredicted RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 MAGEB6Q8N7X4 407 aa12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 TLR7Q9NYK1 1049 aaKnown RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 SAP30BPQ9UHR5 308 aaKnown RBP12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 HTTP42858 3142 aa12.14□□□□□ -0.47
RHOXF1P3-201ENST00000635058 TFRCP02786 760 aaKnown RBP12.13□□□□□ -0.47
RHOXF1P3-201ENST00000635058 MTMR2Q13614 643 aa12.13□□□□□ -0.47
RHOXF1P3-201ENST00000635058 RRP1BQ14684 758 aaKnown RBP12.13□□□□□ -0.47
RHOXF1P3-201ENST00000635058 HABP4Q5JVS0 413 aaKnown RBP12.13□□□□□ -0.47
RHOXF1P3-201ENST00000635058 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
RHOXF1P3-201ENST00000635058 U2AF1L4Q8WU68 220 aaKnown RBP12.13□□□□□ -0.47
RHOXF1P3-201ENST00000635058 DDX19BQ9UMR2 479 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms