RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 WDHD1O75717 1129 aaPredicted RBP9.31□□□□□ -0.92
GPC3-204ENST00000631057 TNNT1P13805 278 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 IFNAR1P17181 557 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 RXRAP19793 462 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 MARCKSP29966 332 aaPredicted RBP9.31□□□□□ -0.92
GPC3-204ENST00000631057 PTPAQ15257 358 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 RTN1Q16799 776 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 DPCR1Q3MIW9 517 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 RESP18Q5W5W9 173 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 TRIM22Q8IYM9 498 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 TMTC2Q8N394 836 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 C16orf45Q96MC5 204 aaPredicted RBP9.31□□□□□ -0.92
GPC3-204ENST00000631057 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
GPC3-204ENST00000631057 SLC26A6Q9BXS9 759 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
GPC3-204ENST00000631057 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
GPC3-204ENST00000631057 ZSWIM5Q9P217 1185 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 HPSEQ9Y251 543 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 ZNF652Q9Y2D9 606 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 THRAP3Q9Y2W1 955 aaKnown RBP9.31□□□□□ -0.92
GPC3-204ENST00000631057 PAXBP1Q9Y5B6 917 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 SLC4A4Q9Y6R1 1079 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 CCDC88AQ3V6T2 1871 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 SCN7AQ01118 1682 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 A0A087WWV3 80 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 CTIFO43310 598 aaKnown RBP9.3□□□□□ -0.92
GPC3-204ENST00000631057 MYO1BO43795 1136 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 NRDCO43847 1150 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 NTSR2O95665 410 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 SKILP12757 684 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 WTAPQ15007 396 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 SYCP1Q15431 976 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 DDB1Q16531 1140 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 FILIP1Q7Z7B0 1213 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 NKX2-3Q8TAU0 364 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 ERCC4Q92889 916 aaPredicted RBP9.3□□□□□ -0.92
GPC3-204ENST00000631057 FBXW7Q969H0 707 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 MAP3K14Q99558 947 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 SEC31BQ9NQW1 1179 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 KCND1Q9NSA2 647 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 GNL3LQ9NVN8 582 aaKnown RBP9.3□□□□□ -0.92
GPC3-204ENST00000631057 LRP2BPQ9P2M1 347 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 TUBE1Q9UJT0 475 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 LAMB1P07942 1786 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 TAF1P21675 1872 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 CACNA1SQ13698 1873 aa9.3□□□□□ -0.92
GPC3-204ENST00000631057 LOC102724428A0A0B4J2F2 783 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 FAM177BA6PVY3 158 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 KIF2AO00139 706 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 BIN1O00499 593 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 SMC2O95347 1197 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 BCAMP50895 628 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 SIK1P57059 783 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 CCZ1BP86790 482 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 CCZ1P86791 482 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 CHRNDQ07001 517 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 PPP2R5BQ15173 497 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 SHC4Q6S5L8 630 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 NOSTRINQ8IVI9 506 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 LCORLQ8N3X6 602 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 KRI1Q8N9T8 703 aaKnown RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 NOL10Q9BSC4 688 aaKnown RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 MYL10Q9BUA6 226 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 FOXP1Q9H334 677 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 KDM4CQ9H3R0 1056 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 TOMM22Q9NS69 142 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 HOOK1Q9UJC3 728 aaKnown RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 NIP7Q9Y221 180 aaKnown RBP eCLIP9.29□□□□□ -0.922e-12■■■□□ 14.6
GPC3-204ENST00000631057 SPATA31A1Q5TZJ5 1347 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 BCL9LQ86UU0 1499 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 MAST2Q6P0Q8 1798 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 A0A0G2JS52 829 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 NUTM2BA6NNL0 878 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 NUTM2EB1AL46 878 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 CBFA2T2O43439 604 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 DEXIO95424 95 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 MMP1P03956 469 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 RRP12Q5JTH9 1297 aaKnown RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 OLFM4Q6UX06 510 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 NBPF11Q86T75 865 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 NUTM2AQ8IVF1 878 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 CCDC112Q8NEF3 446 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 UBAC1Q9BSL1 405 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 XPO4Q9C0E2 1151 aaKnown RBP9.29□□□□□ -0.92
GPC3-204ENST00000631057 INCENPQ9NQS7 918 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 IFNKQ9P0W0 207 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 ANAPC4Q9UJX5 808 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 TACC3Q9Y6A5 838 aa9.29□□□□□ -0.92
GPC3-204ENST00000631057 DUOX1Q9NRD9 1551 aa9.28□□□□□ -0.92
GPC3-204ENST00000631057 ZNF804BA4D1E1 1349 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms