RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PRAMEF18Q5VWM3 479 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 GPC2Q8N158 579 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 DSCC1Q9BVC3 393 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 CSADQ9Y600 493 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 SLC12A7Q9Y666 1083 aa14.54□□□□□ -0.08
SYNGAP1-207ENST00000628646 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 EPS15P42566 896 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 TRIM29Q14134 588 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 WTAPQ15007 396 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 CAVIN1Q6NZI2 390 aaKnown RBP14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 LY75O60449 1722 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 MICU3Q86XE3 530 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 CTCFLQ8NI51 663 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 RRAGCQ9HB90 399 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 EPHX2P34913 555 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 FAM47AQ5JRC9 791 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 CATIPQ7Z7H3 387 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 PRMT6Q96LA8 375 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 ZSWIM6Q9HCJ5 1215 aa14.53□□□□□ -0.08
SYNGAP1-207ENST00000628646 PRC1O43663 620 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 IFIT1BQ5T764 474 aaKnown RBP14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 LAMA4Q16363 1823 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 FAM205AQ6ZU69 1335 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 FAM196BA6NMK8 535 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 SLC27A2O14975 620 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 WDR78Q5VTH9 848 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 HHIPL2Q6UWX4 724 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 MAP4K1Q92918 833 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 BRF1Q92994 677 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 SERPINB13Q9UIV8 391 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 SERPINA10Q9UK55 444 aa14.52□□□□□ -0.08
SYNGAP1-207ENST00000628646 C15orf52Q6ZUT6 534 aaKnown RBP14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 RBSNQ9H1K0 784 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 TAF6LQ9Y6J9 622 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 TFAP4Q01664 338 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 RASA3Q14644 834 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 NBPF9Q3BBW0 867 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 CDC42EP5Q6NZY7 148 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 VAT1LQ9HCJ6 419 aa14.52□□□□□ -0.09
SYNGAP1-207ENST00000628646 APOBEC3FQ8IUX4 373 aaKnown RBP14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 DYNLL2Q96FJ2 89 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 YDJCA8MPS7 323 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 PDCP20941 246 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 CERKLQ49MI3 558 aaPredicted RBP14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 AKNAD1Q5T1N1 836 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 ADARB2Q9NS39 739 aaKnown RBP14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 ZNF70Q9UC06 446 aaPredicted RBP14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 UBR3Q6ZT12 1888 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 PPFIA3O75145 1194 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 MBD3O95983 291 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 CYP2D6P10635 497 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 GRIK5Q16478 980 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 TMEM87AQ8NBN3 555 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 C7orf43Q8WVR3 580 aa14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 RTFDC1Q9BY42 306 aaPredicted RBP14.51□□□□□ -0.09
SYNGAP1-207ENST00000628646 WDR33Q9C0J8 1336 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 CLCN1P35523 988 aa14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 PNMA8AQ86V59 439 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 CERS5Q8N5B7 392 aa14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 DHX36Q9H2U1 1008 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 FOXD4L6Q3SYB3 417 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 FOXD4L3Q6VB84 417 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 TRIM22Q8IYM9 498 aa14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 ABT1Q9ULW3 272 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 GDF11O95390 407 aa14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 VIL1P09327 827 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 ZNF541Q9H0D2 1346 aa14.5□□□□□ -0.09
SYNGAP1-207ENST00000628646 DCP1AQ9NPI6 582 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 C4AP0C0L4 1744 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 KLF18A0A0U1RQI7 1052 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 YY1P25490 414 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 PDLIM2Q96JY6 352 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 VPS37CA5D8V6 355 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 LIMCH1Q9UPQ0 1083 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 GADD45BO75293 160 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 Q6ZUG5 572 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 DPF2Q92785 391 aa14.49□□□□□ -0.09
SYNGAP1-207ENST00000628646 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 MARCH6O60337 910 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 SH2B1Q9NRF2 756 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 HDLBPQ00341 1268 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 CCDC178Q5BJE1 867 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 TMED8Q6PL24 325 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 DHX32Q7L7V1 743 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 DDX11Q96FC9 970 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 DEFB129Q9H1M3 183 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 GPRC5DQ9NZD1 345 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
SYNGAP1-207ENST00000628646 GPR75-ASB3A0A0A6YYF3 556 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms