RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 TM9SF2Q99805 663 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 CNTNAP3Q9BZ76 1288 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 RASSF4Q9H2L5 321 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 SENP2Q9HC62 589 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 ST7Q9NRC1 585 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 FANCLQ9NW38 375 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 IFT57Q9NWB7 429 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 ZNRF3Q9ULT6 936 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 NSFL1CQ9UNZ2 370 aaKnown RBP3.85□□□□□ -1.79
SCN8A-210ENST00000627665 MAPK8IP1Q9UQF2 711 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 SPATA31A6Q5VVP1 1343 aa3.85□□□□□ -1.79
SCN8A-210ENST00000627665 CDK13Q14004 1512 aaKnown RBP3.85□□□□□ -1.79
SCN8A-210ENST00000627665 CLTCQ00610 1675 aaKnown RBP3.84□□□□□ -1.79
SCN8A-210ENST00000627665 FAM221AA4D161 298 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 IQCA1LA6NCM1 817 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 METTL12A8MUP2 240 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 AGRPO00253 132 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 MARCH6O60337 910 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 CYP11A1P05108 521 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 CRKP46108 304 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 PTSQ03393 145 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 IKBKEQ14164 716 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 NCAPHQ15003 741 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 TCEA2Q15560 299 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 ZC3H12BQ5HYM0 836 aaKnown RBP3.84□□□□□ -1.79
SCN8A-210ENST00000627665 TRIM67Q6ZTA4 783 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 EEPD1Q7L9B9 569 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 HDXQ7Z353 690 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 FAM35AQ86V20 835 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 ACSBG1Q96GR2 724 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 CCDC136Q96JN2 1154 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 IPO9Q96P70 1041 aaKnown RBP3.84□□□□□ -1.79
SCN8A-210ENST00000627665 CEP89Q96ST8 783 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 FEZ1Q99689 392 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 SLC30A3Q99726 388 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 POLR3GLQ9BT43 218 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 MUC3BQ9H195 1237 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 EHMT1Q9H9B1 1298 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 BRMS1Q9HCU9 246 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 AVENQ9NQS1 362 aaPredicted RBP3.84□□□□□ -1.79
SCN8A-210ENST00000627665 STRN4Q9NRL3 753 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 DNAJB12Q9NXW2 375 aaKnown RBP3.84□□□□□ -1.79
SCN8A-210ENST00000627665 MSRB2Q9Y3D2 182 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 PCDHB14Q9Y5E9 798 aa3.84□□□□□ -1.79
SCN8A-210ENST00000627665 SETBP1Q9Y6X0 1596 aa3.84□□□□□ -1.8
SCN8A-210ENST00000627665 MYO5CQ9NQX4 1742 aa3.84□□□□□ -1.8
SCN8A-210ENST00000627665 SENP3-EIF4A1A0A087X0R7 540 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 CCDC163A0A0D9SF12 145 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 SLC35F4A4IF30 521 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 FAM221BA6H8Z2 402 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 J3QW42 95 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 NFKBIEO00221 500 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 RAB11FIP3O75154 756 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 SIN3BO75182 1162 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 PAGE1O75459 146 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 TRPA1O75762 1119 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 ATE1O95260 518 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 NAT2P11245 290 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 ACPPP15309 386 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 BMP6P22004 513 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 ALAS2P22557 587 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 CDC27P30260 824 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 ZNF157P51786 506 aaPredicted RBP3.83□□□□□ -1.8
SCN8A-210ENST00000627665 MLLT1Q03111 559 aaPredicted RBP3.83□□□□□ -1.8
SCN8A-210ENST00000627665 PDE4BQ07343 736 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 FAAP100Q0VG06 881 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 SEPT6Q14141 434 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 C2orf27AQ580R0 203 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 HFE2Q6ZVN8 426 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 TRIM46Q7Z4K8 759 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 RAB44Q7Z6P3 723 aaPredicted RBP3.83□□□□□ -1.8
SCN8A-210ENST00000627665 SYT9Q86SS6 491 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 CCDC155Q8N6L0 562 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 ST13P5Q8NFI4 369 aaPredicted RBP3.83□□□□□ -1.8
SCN8A-210ENST00000627665 MICAL1Q8TDZ2 1067 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 PLD4Q96BZ4 506 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 SLC26A8Q96RN1 970 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 POP1Q99575 1024 aaKnown RBP3.83□□□□□ -1.8
SCN8A-210ENST00000627665 EPN3Q9H201 632 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 PCDH12Q9NPG4 1184 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 NDFIP2Q9NV92 336 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 PLAAQ9Y263 795 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 PCDHB5Q9Y5E4 795 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 TACC3Q9Y6A5 838 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 SPAG9O60271 1321 aaKnown RBP3.83□□□□□ -1.8
SCN8A-210ENST00000627665 CLIP1P30622 1438 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 A2MP01023 1474 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 LRRC9Q6ZRR7 1453 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 NLRP1Q9C000 1473 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 KDM5DQ9BY66 1539 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 UGGT1Q9NYU2 1555 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 DEPDC5O75140 1603 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 LRP6O75581 1613 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 IQGAP1P46940 1657 aa3.83□□□□□ -1.8
SCN8A-210ENST00000627665 KIDINS220Q9ULH0 1771 aa3.82□□□□□ -1.8
SCN8A-210ENST00000627665 ITSN2Q9NZM3 1697 aa3.82□□□□□ -1.8
SCN8A-210ENST00000627665 ROBO1Q9Y6N7 1651 aa3.82□□□□□ -1.8
SCN8A-210ENST00000627665 KIF14Q15058 1648 aa3.82□□□□□ -1.8
SCN8A-210ENST00000627665 RGS12O14924 1447 aa3.82□□□□□ -1.8
SCN8A-210ENST00000627665 TROQ12816 1431 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms