RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 HERC5Q9UII4 1024 aaKnown RBP31.31■■■□□ 2.6
TCF4-259ENST00000627568 FOCADQ5VW36 1801 aa31.31■■■□□ 2.6
TCF4-259ENST00000627568 HMMRO75330 724 aa31.3■■■□□ 2.6
TCF4-259ENST00000627568 IDH1O75874 414 aaKnown RBP31.3■■■□□ 2.6
TCF4-259ENST00000627568 ECM2O94769 699 aaPredicted RBP31.3■■■□□ 2.6
TCF4-259ENST00000627568 PRMT2P55345 433 aa31.3■■■□□ 2.6
TCF4-259ENST00000627568 TGFBRAP1Q8WUH2 860 aa31.3■■■□□ 2.6
TCF4-259ENST00000627568 PI4KBQ9UBF8 816 aa31.3■■■□□ 2.6
TCF4-259ENST00000627568 COG6Q9Y2V7 657 aa31.3■■■□□ 2.6
TCF4-259ENST00000627568 CENPFP49454 3210 aa31.3■■■□□ 2.6
TCF4-259ENST00000627568 CYP2C8P10632 490 aa31.29■■■□□ 2.6
TCF4-259ENST00000627568 ADGRA1Q86SQ6 560 aa31.29■■■□□ 2.6
TCF4-259ENST00000627568 ZNF333Q96JL9 665 aa31.29■■■□□ 2.6
TCF4-259ENST00000627568 TMEM106CQ9BVX2 250 aa31.29■■■□□ 2.6
TCF4-259ENST00000627568 CHMP4BQ9H444 224 aaKnown RBP31.29■■■□□ 2.6
TCF4-259ENST00000627568 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.29■■■□□ 2.6
TCF4-259ENST00000627568 RCAN3Q9UKA8 241 aa31.29■■■□□ 2.6
TCF4-259ENST00000627568 SLC45A1Q9Y2W3 748 aa31.29■■■□□ 2.6
TCF4-259ENST00000627568 POTEFA5A3E0 1075 aa31.28■■■□□ 2.6
TCF4-259ENST00000627568 CYP7A1P22680 504 aa31.28■■■□□ 2.6
TCF4-259ENST00000627568 PSMC4P43686 418 aa31.28■■■□□ 2.6
TCF4-259ENST00000627568 MAPKAPK5Q8IW41 473 aa31.28■■■□□ 2.6
TCF4-259ENST00000627568 RPAP2Q8IXW5 612 aaPredicted RBP31.28■■■□□ 2.6
TCF4-259ENST00000627568 TBC1D2Q9BYX2 928 aa31.28■■■□□ 2.6
TCF4-259ENST00000627568 FLT1P17948 1338 aa31.27■■■□□ 2.6
TCF4-259ENST00000627568 HOXD10P28358 340 aa31.27■■■□□ 2.6
TCF4-259ENST00000627568 CCDC84Q86UT8 332 aaPredicted RBP31.27■■■□□ 2.6
TCF4-259ENST00000627568 RHPN1Q8TCX5 695 aa31.27■■■□□ 2.6
TCF4-259ENST00000627568 TRIM34Q9BYJ4 488 aa31.27■■■□□ 2.6
TCF4-259ENST00000627568 FMNL1O95466 1100 aaPredicted RBP31.26■■■□□ 2.59
TCF4-259ENST00000627568 CAP2P40123 477 aa31.26■■■□□ 2.59
TCF4-259ENST00000627568 CERS3Q8IU89 383 aa31.26■■■□□ 2.59
TCF4-259ENST00000627568 SMCR8Q8TEV9 937 aaPredicted RBP31.26■■■□□ 2.59
TCF4-259ENST00000627568 IL1RAPL2Q9NP60 686 aa31.26■■■□□ 2.59
TCF4-259ENST00000627568 CLASRPQ8N2M8 674 aaKnown RBP31.25■■■□□ 2.59
TCF4-259ENST00000627568 TRIM47Q96LD4 638 aa31.25■■■□□ 2.59
TCF4-259ENST00000627568 AGTPBP1Q9UPW5 1226 aa31.25■■■□□ 2.59
TCF4-259ENST00000627568 SIPA1L1O43166 1804 aa31.25■■■□□ 2.59
TCF4-259ENST00000627568 BCRP11274 1271 aa31.24■■■□□ 2.59
TCF4-259ENST00000627568 MAP3K12Q12852 859 aa31.24■■■□□ 2.59
TCF4-259ENST00000627568 CRACR2BQ8N4Y2 399 aaPredicted RBP31.24■■■□□ 2.59
TCF4-259ENST00000627568 ZNF280CQ8ND82 737 aa31.24■■■□□ 2.59
TCF4-259ENST00000627568 KIF1BPQ96EK5 621 aa31.24■■■□□ 2.59
TCF4-259ENST00000627568 ZBTB40Q9NUA8 1239 aa31.24■■■□□ 2.59
TCF4-259ENST00000627568 SRRDQ9UH36 339 aa31.24■■■□□ 2.59
TCF4-259ENST00000627568 APBB1O00213 710 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 HLA-DOAP06340 250 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 FCGRTP55899 365 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 TMED8Q6PL24 325 aaPredicted RBP31.23■■■□□ 2.59
TCF4-259ENST00000627568 MAGEB6Q8N7X4 407 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 PROCA1Q8NCQ7 364 aaPredicted RBP31.23■■■□□ 2.59
TCF4-259ENST00000627568 AS3MTQ9HBK9 375 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 PNMA3Q9UL41 463 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 NDUFB9Q9Y6M9 179 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 MGAMO43451 1857 aa31.23■■■□□ 2.59
TCF4-259ENST00000627568 USP17L5A8MUK1 530 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 OSBPP22059 807 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 CTGFP29279 349 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 DYNLL1P63167 89 aaKnown RBP31.22■■■□□ 2.59
TCF4-259ENST00000627568 SPP2Q13103 211 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 SLC4A8Q2Y0W8 1093 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 RAET1EQ8TD07 263 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 SH3TC2Q8TF17 1288 aa31.22■■■□□ 2.59
TCF4-259ENST00000627568 LOC285556D6RIA3 1793 aa31.21■■■□□ 2.59
TCF4-259ENST00000627568 PRPF38BQ5VTL8 546 aaKnown RBP31.21■■■□□ 2.59
TCF4-259ENST00000627568 FOXP4Q8IVH2 680 aaPredicted RBP31.21■■■□□ 2.59
TCF4-259ENST00000627568 MIGA1Q8NAN2 632 aa31.21■■■□□ 2.59
TCF4-259ENST00000627568 ANTXR1Q9H6X2 564 aa31.21■■■□□ 2.59
TCF4-259ENST00000627568 PALD1Q9ULE6 856 aa31.21■■■□□ 2.59
TCF4-259ENST00000627568 MYPNQ86TC9 1320 aa31.21■■■□□ 2.59
TCF4-259ENST00000627568 MYH1P12882 1939 aa31.2■■■□□ 2.59
TCF4-259ENST00000627568 IFIT2P09913 472 aaKnown RBP31.2■■■□□ 2.59
TCF4-259ENST00000627568 TTF1Q15361 905 aaPredicted RBP31.2■■■□□ 2.59
TCF4-259ENST00000627568 SAP30BPQ9UHR5 308 aaKnown RBP31.2■■■□□ 2.59
TCF4-259ENST00000627568 ASNSP08243 561 aa31.19■■■□□ 2.58
TCF4-259ENST00000627568 USP5P45974 858 aa31.19■■■□□ 2.58
TCF4-259ENST00000627568 RRP1BQ14684 758 aaKnown RBP31.19■■■□□ 2.58
TCF4-259ENST00000627568 RAB11FIP3O75154 756 aa31.18■■■□□ 2.58
TCF4-259ENST00000627568 MYCP01106 439 aaPredicted RBP31.18■■■□□ 2.58
TCF4-259ENST00000627568 EN2P19622 333 aaPredicted RBP31.18■■■□□ 2.58
TCF4-259ENST00000627568 HMGCS2P54868 508 aa31.18■■■□□ 2.58
TCF4-259ENST00000627568 PABPC4Q13310 644 aaKnown RBP eCLIP31.18■■■□□ 2.58
TCF4-259ENST00000627568 TREML2Q5T2D2 321 aa31.18■■■□□ 2.58
TCF4-259ENST00000627568 BCL11AQ9H165 835 aa31.18■■■□□ 2.58
TCF4-259ENST00000627568 METTL16Q86W50 562 aaKnown RBP31.17■■■□□ 2.58
TCF4-259ENST00000627568 SIRT2Q8IXJ6 389 aa31.17■■■□□ 2.58
TCF4-259ENST00000627568 DNAJC18Q9H819 358 aa31.17■■■□□ 2.58
TCF4-259ENST00000627568 BRCA2P51587 3418 aa31.16■■■□□ 2.58
TCF4-259ENST00000627568 GINM1Q9NU53 330 aa31.16■■■□□ 2.58
TCF4-259ENST00000627568 GRK4P32298 578 aa31.15■■■□□ 2.58
TCF4-259ENST00000627568 PRKCZQ05513 592 aa31.14■■■□□ 2.58
TCF4-259ENST00000627568 PDE3AQ14432 1141 aa31.14■■■□□ 2.58
TCF4-259ENST00000627568 SH3D19Q5HYK7 790 aa31.14■■■□□ 2.58
TCF4-259ENST00000627568 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.14■■■□□ 2.58
TCF4-259ENST00000627568 DNAJC2Q99543 621 aaKnown RBP31.14■■■□□ 2.58
TCF4-259ENST00000627568 WDR18Q9BV38 432 aa31.14■■■□□ 2.58
TCF4-259ENST00000627568 TNPO2O14787 897 aaKnown RBP31.13■■■□□ 2.57
TCF4-259ENST00000627568 GDF11O95390 407 aa31.13■■■□□ 2.57
TCF4-259ENST00000627568 MTMR2Q13614 643 aa31.13■■■□□ 2.57
TCF4-259ENST00000627568 ANKRD13CQ8N6S4 541 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms