RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MYH3P11055 1940 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 AGERQ15109 404 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 KIF4BQ2VIQ3 1234 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 METTL24Q5JXM2 366 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 TTLL5Q6EMB2 1281 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 VPS37DQ86XT2 251 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
TCF4-249ENST00000625716 TRPM4Q8TD43 1214 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 KAZALD1Q96I82 304 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 PURBQ96QR8 312 aaKnown RBP7.98□□□□□ -1.13
TCF4-249ENST00000625716 MKRN1Q9UHC7 482 aaKnown RBP7.98□□□□□ -1.13
TCF4-249ENST00000625716 PGAP2Q9UHJ9 254 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 HDAC9Q9UKV0 1011 aa7.98□□□□□ -1.13
TCF4-249ENST00000625716 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 SOBPA7XYQ1 873 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 BCAR3O75815 825 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
TCF4-249ENST00000625716 GNAI3P08754 354 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 MMP14P50281 582 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 HIRAP54198 1017 aaPredicted RBP7.97□□□□□ -1.13
TCF4-249ENST00000625716 GTF2IP78347 998 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 NR5A1Q13285 461 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 UBE4AQ14139 1066 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 DEFB115Q30KQ5 88 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 RABL6Q3YEC7 729 aaPredicted RBP7.97□□□□□ -1.13
TCF4-249ENST00000625716 C15orf52Q6ZUT6 534 aaKnown RBP7.97□□□□□ -1.13
TCF4-249ENST00000625716 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 TXNRD3Q86VQ6 643 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 GLIS2Q9BZE0 524 aaPredicted RBP7.97□□□□□ -1.13
TCF4-249ENST00000625716 PUS3Q9BZE2 481 aaKnown RBP7.97□□□□□ -1.13
TCF4-249ENST00000625716 ZNF408Q9H9D4 720 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 CD209Q9NNX6 404 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 MYOZ2Q9NPC6 264 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 LTBP1Q14766 1721 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 ZBED9Q6R2W3 1325 aa7.97□□□□□ -1.13
TCF4-249ENST00000625716 H3BM21 787 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 SNAP23O00161 211 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 TRAF5O00463 557 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 FRAT2O75474 233 aaPredicted RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 CELF2O95319 508 aaKnown RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 KLRK1P26718 216 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 HIBADHP31937 336 aaKnown RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 ZNF280AP59817 542 aaPredicted RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 SCARF1Q14162 830 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 CAVIN4Q5BKX8 364 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 DACT2Q5SW24 774 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 ZKSCAN2Q63HK3 967 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 ATF7IPQ6VMQ6 1270 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 FTSJ3Q8IY81 847 aaKnown RBP7.96□□□□□ -1.14
TCF4-249ENST00000625716 JMYQ8N9B5 988 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 LRRN4Q8WUT4 740 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 FAM117AQ9C073 453 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 RIPOR2Q9Y4F9 1068 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 SPEF2Q9C093 1822 aa7.96□□□□□ -1.14
TCF4-249ENST00000625716 ADAMTSL1Q8N6G6 1762 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 IFIT1P09914 478 aaKnown RBP7.95□□□□□ -1.14
TCF4-249ENST00000625716 TRIM27P14373 513 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 IL1R1P14778 569 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 GMPRP36959 345 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 ECE1P42892 770 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 FMR1Q06787 632 aaKnown RBP eCLIP7.95□□□□□ -1.14
TCF4-249ENST00000625716 GRM1Q13255 1194 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 SKIV2LQ15477 1246 aaKnown RBP7.95□□□□□ -1.14
TCF4-249ENST00000625716 LRRC24Q50LG9 513 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
TCF4-249ENST00000625716 KIAA0825Q8IV33 1275 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 TRMT44Q8IYL2 757 aaKnown RBP7.95□□□□□ -1.14
TCF4-249ENST00000625716 KLHDC4Q8TBB5 520 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 GMLQ99445 158 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
TCF4-249ENST00000625716 MXD3Q9BW11 206 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 KDM4CQ9H3R0 1056 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 GGA3Q9NZ52 723 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 LRRFIP2Q9Y608 721 aaKnown RBP7.95□□□□□ -1.14
TCF4-249ENST00000625716 CNTNAP1P78357 1384 aa7.95□□□□□ -1.14
TCF4-249ENST00000625716 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 F8W031 263 aaPredicted RBP7.94□□□□□ -1.14
TCF4-249ENST00000625716 EYA2O00167 538 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 SASH1O94885 1247 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 PDE8BO95263 885 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 EGFRP00533 1210 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 GNAI2P04899 355 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 SLC5A1P13866 664 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 GYG1P46976 350 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 RBM5P52756 815 aaKnown RBP eCLIP7.94□□□□□ -1.14
TCF4-249ENST00000625716 PUM3Q15397 648 aaKnown RBP7.94□□□□□ -1.14
TCF4-249ENST00000625716 DLGAP5Q15398 846 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 CST9Q5W186 159 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 NPAS3Q8IXF0 933 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 C2orf69Q8N8R5 385 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 FAM84BQ96KN1 310 aaPredicted RBP7.94□□□□□ -1.14
TCF4-249ENST00000625716 MEIS3Q99687 375 aa7.94□□□□□ -1.14
TCF4-249ENST00000625716 SIL1Q9H173 461 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms