RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 IDH1O75874 414 aaKnown RBP8.79□□□□□ -1
NPLOC4-221ENST00000625705 DNAJB2P25686 324 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 HDLBPQ00341 1268 aaKnown RBP8.79□□□□□ -1
NPLOC4-221ENST00000625705 GRM1Q13255 1194 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 GRIK5Q16478 980 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 ANKRD45Q5TZF3 282 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 GCC1Q96CN9 775 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 DCTPP1Q9H773 170 aa8.79□□□□□ -1
NPLOC4-221ENST00000625705 TDRD3Q9H7E2 651 aaKnown RBP8.79□□□□□ -1
NPLOC4-221ENST00000625705 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
NPLOC4-221ENST00000625705 TCP10L2B9ZVM9 353 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 LDHCP07864 332 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 ZAP70P43403 619 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 HDAC1Q13547 482 aaPredicted RBP8.78□□□□□ -1
NPLOC4-221ENST00000625705 TTF1Q15361 905 aaPredicted RBP8.78□□□□□ -1
NPLOC4-221ENST00000625705 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
NPLOC4-221ENST00000625705 C2orf69Q8N8R5 385 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 NKX2-3Q8TAU0 364 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 CDCA5Q96FF9 252 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 PRMT6Q96LA8 375 aaPredicted RBP8.78□□□□□ -1
NPLOC4-221ENST00000625705 ZDHHC15Q96MV8 337 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 PGAP2Q9UHJ9 254 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 PCDHAC2Q9Y5I4 1007 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 MYH2Q9UKX2 1941 aa8.78□□□□□ -1
NPLOC4-221ENST00000625705 GOLIM4O00461 696 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 CACNB3P54284 484 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 HTRA3P83110 453 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 MECOMQ03112 1051 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 FMR1Q06787 632 aaKnown RBP eCLIP8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 HHIPL2Q6UWX4 724 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 ZNF512BQ96KM6 892 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 BOLA2Q9H3K6 86 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 ECHDC1Q9NTX5 307 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 ZNF70Q9UC06 446 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 DAGLAQ9Y4D2 1042 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 PPP2R3BQ9Y5P8 575 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 MROH7-TTC4A0A0A0MT08 1334 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 PASKQ96RG2 1323 aa8.77□□□□□ -1.01
NPLOC4-221ENST00000625705 POLR2AP24928 1970 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 RCCD1A6NED2 376 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 ERC2O15083 957 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 BAG3O95817 575 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 BTDP43251 543 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 PRKG1Q13976 671 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 RASA3Q14644 834 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 PRAMEF18Q5VWM3 479 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 DLK2Q6UY11 383 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.76□□□□□ -1.011e-9■■■■□ 24.6
NPLOC4-221ENST00000625705 DEFB129Q9H1M3 183 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 TMEM134Q9H6X4 195 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 GBA2Q9HCG7 927 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 USP40Q9NVE5 1235 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 NDUFB9Q9Y6M9 179 aa8.76□□□□□ -1.01
NPLOC4-221ENST00000625705 CYP2E1P05181 493 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 ATP5JP18859 108 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 MX1P20591 662 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 CYP7A1P22680 504 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 HUNKP57058 714 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 TCP10Q12799 353 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 PICALMQ13492 652 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 SUPT20HL1Q3ZLR7 823 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 ARMC9Q7Z3E5 817 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 MAGEB6Q8N7X4 407 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 HOOK2Q96ED9 719 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 ZBED3Q96IU2 234 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 MRIQ9BWK5 157 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 PAG1Q9NWQ8 432 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 AKAP11Q9UKA4 1901 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 PAPPA2Q9BXP8 1791 aa8.75□□□□□ -1.01
NPLOC4-221ENST00000625705 AK9Q5TCS8 1911 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 PPP1R12BO60237 982 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 GLRX3O76003 335 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 ECE1P42892 770 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 DEFB115Q30KQ5 88 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 LRRFIP1Q32MZ4 808 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 TSHZ3Q63HK5 1081 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 APOBEC3HQ6NTF7 200 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 CDC42EP5Q6NZY7 148 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 NSUN4Q96CB9 384 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 HAUS7Q99871 368 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 ANTXR1Q9H6X2 564 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 AATFQ9NY61 560 aaKnown RBP eCLIP8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 GAKO14976 1311 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 AOX1Q06278 1338 aa8.74□□□□□ -1.01
NPLOC4-221ENST00000625705 TTC41PQ6P2S7 1318 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms