RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SAFBQ15424 915 aaKnown RBP eCLIP12.95□□□□□ -0.34
VARS2-213ENST00000625423 RTN1Q16799 776 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
VARS2-213ENST00000625423 UTP14CQ5TAP6 766 aaKnown RBP12.94□□□□□ -0.34
VARS2-213ENST00000625423 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
VARS2-213ENST00000625423 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
VARS2-213ENST00000625423 HOMER1Q86YM7 354 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 STAG1Q8WVM7 1258 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 NACAP1Q9BZK3 213 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
VARS2-213ENST00000625423 NR5A1Q13285 461 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
VARS2-213ENST00000625423 VSTM4Q8IW00 320 aa12.94□□□□□ -0.34
VARS2-213ENST00000625423 ZHX1Q9UKY1 873 aaPredicted RBP12.94□□□□□ -0.34
VARS2-213ENST00000625423 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 POLR2DO15514 142 aaKnown RBP12.93□□□□□ -0.34
VARS2-213ENST00000625423 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
VARS2-213ENST00000625423 FBXO38Q6PIJ6 1188 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 L2HGDHQ9H9P8 463 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
VARS2-213ENST00000625423 PCDHB6Q9Y5E3 794 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 MYH3P11055 1940 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 SLIT2O94813 1529 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 ERICH2A1L162 156 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 PTPREP23469 700 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 LRRN4CLQ8ND94 238 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
VARS2-213ENST00000625423 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
VARS2-213ENST00000625423 MAN1B1Q9UKM7 699 aa12.93□□□□□ -0.34
VARS2-213ENST00000625423 IGSF3O75054 1194 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
VARS2-213ENST00000625423 INTS13Q9NVM9 706 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 GNAT2P19087 354 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 POSTNQ15063 836 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 GRAMD1CQ8IYS0 662 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 OXER1Q8TDS5 423 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 FOXP1Q9H334 677 aaPredicted RBP12.92□□□□□ -0.34
VARS2-213ENST00000625423 TMX1Q9H3N1 280 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
VARS2-213ENST00000625423 ECM29Q5VYK3 1845 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 ITGB4P16144 1822 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 DEXIO95424 95 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 ERCC6LQ2NKX8 1250 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 RILPL1Q5EBL4 403 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 PDILTQ8N807 584 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 DNAI1Q9UI46 699 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
VARS2-213ENST00000625423 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 NID2Q14112 1375 aa12.92□□□□□ -0.34
VARS2-213ENST00000625423 EXOC5O00471 708 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 ETF1P62495 437 aaKnown RBP12.91□□□□□ -0.34
VARS2-213ENST00000625423 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 AK7Q96M32 723 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 MORC2Q9Y6X9 1032 aaPredicted RBP12.91□□□□□ -0.34
VARS2-213ENST00000625423 LRP5O75197 1615 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 NUP98P52948 1817 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
VARS2-213ENST00000625423 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
VARS2-213ENST00000625423 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 CCP110O43303 1012 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
VARS2-213ENST00000625423 PPARAQ07869 468 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 ELOA2Q8IYF1 753 aaPredicted RBP12.9□□□□□ -0.34
VARS2-213ENST00000625423 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
VARS2-213ENST00000625423 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■□□□ 13.1
VARS2-213ENST00000625423 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 MYO1BO43795 1136 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 TUBB4AP04350 444 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 SMARCE1Q969G3 411 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 NFE2L3Q9Y4A8 694 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 CDK11BP21127 795 aaKnown RBP12.9□□□□□ -0.34
VARS2-213ENST00000625423 CYP7A1P22680 504 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
VARS2-213ENST00000625423 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 TRIM65Q6PJ69 517 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 REXO1L1PQ8IX06 675 aa12.9□□□□□ -0.34
VARS2-213ENST00000625423 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
VARS2-213ENST00000625423 DISP2A7MBM2 1401 aa12.9□□□□□ -0.35
VARS2-213ENST00000625423 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
VARS2-213ENST00000625423 TMEM139Q8IV31 216 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 CSRNP2Q9H175 543 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms