RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 HPSEQ9Y251 543 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 UBE2Q2LH0YL09 131 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 DEXIO95424 95 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 CCDC144BQ3MJ40 725 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 TBC1D9BQ66K14 1250 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 SHC4Q6S5L8 630 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 NBPF11Q86T75 865 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 NOSTRINQ8IVI9 506 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 ZNF654Q8IZM8 581 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 CRACR2BQ8N4Y2 399 aaPredicted RBP9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 FAM84BQ96KN1 310 aaPredicted RBP9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 WTIPA6NIX2 430 aaPredicted RBP9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 NEMFO60524 1076 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 CUTAO60888 179 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 GUCY1A2P33402 732 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 RESP18Q5W5W9 173 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 FANCBQ8NB91 859 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 CACTINQ8WUQ7 758 aaKnown RBP9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 CELF1Q92879 486 aaKnown RBP9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 BRIP1Q9BX63 1249 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 NYXQ9GZU5 481 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 CACNA1SQ13698 1873 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 SEMA3EO15041 775 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 HSPA1LP34931 641 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 CHAF1AQ13111 956 aaPredicted RBP9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 PPP2R5BQ15173 497 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 LRRC8AQ8IWT6 810 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 DIS3L2Q8IYB7 885 aaKnown RBP9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 NUP133Q8WUM0 1156 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 FOXP1Q9H334 677 aaPredicted RBP9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 NARFQ9UHQ1 456 aa9.6□□□□□ -0.87
SND1-IT1-201ENST00000623342 BTBD18B2RXH4 712 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 BIN1O00499 593 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 GTF2F1P35269 517 aaKnown RBP eCLIP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 DYNLL1P63167 89 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 TPM4P67936 248 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 SEC23AQ15436 765 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 TUBE1Q9UJT0 475 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 TNKSO95271 1327 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 PDS5AQ29RF7 1337 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 SMTNL1A8MU46 457 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 PCP11498 1178 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 RPS8P62241 208 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 RBM10P98175 930 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 VPS72Q15906 364 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 RILPL1Q5EBL4 403 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 PPP4R3CPQ6ZMV5 832 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 CCDC82Q8N4S0 544 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 CLIC6Q96NY7 704 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 NLRP3Q96P20 1036 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 ZSCAN10Q96SZ4 725 aaPredicted RBP9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 PDCL3Q9H2J4 239 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 KCNJ14Q9UNX9 436 aa9.59□□□□□ -0.87
SND1-IT1-201ENST00000623342 DUOX1Q9NRD9 1551 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 RPS6KA4O75676 772 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 TOB1P50616 345 aaPredicted RBP9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 CMTR1Q8N1G2 835 aaKnown RBP9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 RNF26Q9BY78 433 aaPredicted RBP9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 ANKRD2Q9GZV1 360 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 IKBKBO14920 756 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 FGRP09769 529 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 SLC51AQ86UW1 340 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 ENAHQ8N8S7 591 aaPredicted RBP9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 NSUN4Q96CB9 384 aaKnown RBP9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 MAP7D2Q96T17 732 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 KCNH3Q9ULD8 1083 aa9.58□□□□□ -0.88
SND1-IT1-201ENST00000623342 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 ZPR1O75312 459 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 HIBADHP31937 336 aaKnown RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 GSDMDP57764 484 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 AKAP17AQ02040 695 aaKnown RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 NCAPHQ15003 741 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 IFIT1BQ5T764 474 aaKnown RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 KRBA2Q6ZNG9 492 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 FILIP1Q7Z7B0 1213 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 CATIPQ7Z7H3 387 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 IQCA1Q86XH1 822 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 ELOA2Q8IYF1 753 aaPredicted RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 IMPACTQ9P2X3 320 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 USP21Q9UK80 565 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 COL24A1Q17RW2 1714 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 CYP2D7A0A087X1C5 515 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 XBP1P17861 261 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 PTPREP23469 700 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 KLRK1P26718 216 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 MECOMQ03112 1051 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 PNOCQ13519 176 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms