RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 CEMIPQ8WUJ3 1361 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 SNX17Q15036 470 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 SKOR2Q2VWA4 1001 aaPredicted RBP6.69□□□□□ -1.34
EBF1-211ENST00000622875 HFE2Q6ZVN8 426 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 MSL3Q8N5Y2 521 aaKnown RBP6.69□□□□□ -1.34
EBF1-211ENST00000622875 CCDC34Q96HJ3 373 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 RNPC3Q96LT9 517 aaKnown RBP6.69□□□□□ -1.34
EBF1-211ENST00000622875 HMX1Q9NP08 348 aaPredicted RBP6.69□□□□□ -1.34
EBF1-211ENST00000622875 ELNP15502 786 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 NBL1P41271 181 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 FLT3LGP49771 235 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 GABPB1Q06547 395 aaPredicted RBP6.69□□□□□ -1.34
EBF1-211ENST00000622875 SEPT14Q6ZU15 432 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 RIC3Q7Z5B4 369 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 CXorf38Q8TB03 319 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 DGLUCYQ7Z3D6 616 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 FAM178BQ8IXR5 827 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 NLRP3Q96P20 1036 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 UIMC1Q96RL1 719 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
EBF1-211ENST00000622875 DDX11L8A8MPP1 907 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 MYCNP04198 464 aaPredicted RBP6.68□□□□□ -1.34
EBF1-211ENST00000622875 RABEP1Q15276 862 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 INCENPQ9NQS7 918 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 POLLQ9UGP5 575 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 UBN2Q6ZU65 1347 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 ZNF500O60304 480 aaPredicted RBP6.68□□□□□ -1.34
EBF1-211ENST00000622875 CCDC175P0C221 793 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 C1orf53Q5VUE5 145 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 FMNL3Q8IVF7 1028 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 GJD3Q8N144 294 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
EBF1-211ENST00000622875 DEFB129Q9H1M3 183 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 PRKAG2Q9UGJ0 569 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 SH3BP5O60239 455 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 CCDC85BQ15834 202 aaPredicted RBP6.68□□□□□ -1.34
EBF1-211ENST00000622875 AP1ARQ63HQ0 302 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 ASCL5Q7RTU5 278 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 UNC79Q9P2D8 2635 aa6.68□□□□□ -1.34
EBF1-211ENST00000622875 COL11A1P12107 1806 aaPredicted RBP6.68□□□□□ -1.34
EBF1-211ENST00000622875 PTPRFP10586 1907 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 CCER2I3L3R5 266 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 MS4A1P11836 297 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 PRKG1Q13976 671 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 FAM43BQ6ZT52 329 aaPredicted RBP6.67□□□□□ -1.34
EBF1-211ENST00000622875 ZNF34Q8IZ26 560 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 TTC5Q8N0Z6 440 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 HMMRO75330 724 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 CASQ1P31415 396 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 CCDC173Q0VFZ6 552 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 HLFQ16534 295 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 FMNL2Q96PY5 1086 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 CPA4Q9UI42 421 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 REV3LO60673 3130 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 SNAPC2Q13487 334 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 ZNF790Q6PG37 636 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.67□□□□□ -1.34
EBF1-211ENST00000622875 KIAA1328Q86T90 577 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 LURAP1LQ8IV03 231 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 ELP3Q9H9T3 547 aa6.67□□□□□ -1.34
EBF1-211ENST00000622875 PPIL2Q13356 520 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 NFKBIBQ15653 356 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 RAB30Q15771 203 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 ZNF513Q8N8E2 541 aaPredicted RBP6.66□□□□□ -1.34
EBF1-211ENST00000622875 GBP4Q96PP9 640 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 RASSF4Q9H2L5 321 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 SCAF8Q9UPN6 1271 aaKnown RBP6.66□□□□□ -1.34
EBF1-211ENST00000622875 USP17L3A6NCW0 530 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 USP17L4A6NCW7 530 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 HOXB3P14651 431 aaPredicted RBP6.66□□□□□ -1.34
EBF1-211ENST00000622875 SASS6Q6UVJ0 657 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 USP17L1Q7RTZ2 530 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 DOCK3Q8IZD9 2030 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 UQCRHLA0A096LP55 91 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 UQCRHP07919 91 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 PUM1Q14671 1186 aaKnown RBP eCLIP6.66□□□□□ -1.34
EBF1-211ENST00000622875 BADQ92934 168 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 POLKQ9UBT6 870 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 A0A1B0GUL6 1792 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 CTAGE5O15320 804 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 KIF5CO60282 957 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 MCM5P33992 734 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.66□□□□□ -1.34
EBF1-211ENST00000622875 TBC1D16Q8TBP0 767 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 NCAPGQ9BPX3 1015 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 PBX4Q9BYU1 374 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 NUB1Q9Y5A7 615 aa6.66□□□□□ -1.34
EBF1-211ENST00000622875 CHD9Q3L8U1 2897 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 ASH1LQ9NR48 2969 aaKnown RBP6.65□□□□□ -1.34
EBF1-211ENST00000622875 C19orf67A6NJJ6 358 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 DOK7Q18PE1 504 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 PARP10Q53GL7 1025 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 SUSD4Q5VX71 490 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 LHX8Q68G74 356 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 HLA-CQ95604 372 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 TRPC6Q9Y210 931 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 SLC45A1Q9Y2W3 748 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 CACNA1GO43497 2377 aa6.65□□□□□ -1.34
EBF1-211ENST00000622875 ROCK2O75116 1388 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms