RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ARPP21Q9UBL0 812 aaPredicted RBP23.64■■□□□ 1.38
PDLIM2-221ENST00000622702 RBM8AQ9Y5S9 174 aaKnown RBP23.64■■□□□ 1.38
PDLIM2-221ENST00000622702 BAZ2AQ9UIF9 1905 aaKnown RBP23.64■■□□□ 1.37
PDLIM2-221ENST00000622702 USP17L12C9JPN9 530 aa23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 USP17L21D6R901 530 aa23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 UBE2Q2LH0YL09 131 aa23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 PPP1R12BO60237 982 aaPredicted RBP23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 CTR9Q6PD62 1173 aa23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 HHIPL1Q96JK4 782 aa23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 DHX36Q9H2U1 1008 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 ANGEL1Q9UNK9 670 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-221ENST00000622702 VEGFBP49765 207 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 GRM1Q13255 1194 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 CYP4F22Q6NT55 531 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 ARMC9Q7Z3E5 817 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 SAP30BPQ9UHR5 308 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 MYH1P12882 1939 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 NECTIN1Q15223 517 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 C12orf60Q5U649 245 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 SH3BP5LQ7L8J4 393 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 AMOTL1Q8IY63 956 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 PALD1Q9ULE6 856 aa23.62■■□□□ 1.37
PDLIM2-221ENST00000622702 POLR3DP05423 398 aaPredicted RBP23.61■■□□□ 1.37
PDLIM2-221ENST00000622702 RGMBQ6NW40 437 aa23.61■■□□□ 1.37
PDLIM2-221ENST00000622702 TTC6Q86TZ1 520 aa23.61■■□□□ 1.37
PDLIM2-221ENST00000622702 CAPNS2Q96L46 248 aa23.61■■□□□ 1.37
PDLIM2-221ENST00000622702 DDTLA6NHG4 134 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-221ENST00000622702 ECE1P42892 770 aa23.6■■□□□ 1.37
PDLIM2-221ENST00000622702 ANAPC4Q9UJX5 808 aa23.6■■□□□ 1.37
PDLIM2-221ENST00000622702 WDR33Q9C0J8 1336 aaKnown RBP23.6■■□□□ 1.37
PDLIM2-221ENST00000622702 USP2O75604 605 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 ZNF157P51786 506 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 PPARAQ07869 468 aa23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 IMMTQ16891 758 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 ZSCAN29Q8IWY8 852 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 HOOK2Q96ED9 719 aa23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 PI4KBQ9UBF8 816 aa23.59■■□□□ 1.37
PDLIM2-221ENST00000622702 ROBO3Q96MS0 1386 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 CYP2D7A0A087X1C5 515 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 MINDY4BA8MYZ0 360 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 HLA-DOAP06340 250 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 CYP2D6P10635 497 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 HSPA4P34932 840 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 PLCD1P51178 756 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 MAP3K11Q16584 847 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 EHD4Q9H223 541 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 TAOK2Q9UL54 1235 aa23.58■■□□□ 1.37
PDLIM2-221ENST00000622702 ZNF213O14771 459 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 CYP21A2P08686 494 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 IREB2P48200 963 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 LDLRAD1Q5T700 205 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 RNF20Q5VTR2 975 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 CREB3L3Q68CJ9 461 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 KCNB2Q92953 911 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 CSRNP1Q96S65 589 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 UPF2Q9HAU5 1272 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 LAMA4Q16363 1823 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 LAMB1P07942 1786 aa23.57■■□□□ 1.36
PDLIM2-221ENST00000622702 SLC27A2O14975 620 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 MIGA2Q7L4E1 593 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 METTL16Q86W50 562 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 MCCP23508 829 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 HAND2P61296 217 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 EVX2Q03828 476 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 GABPAQ06546 454 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 SLC4A8Q2Y0W8 1093 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 DCAF15Q66K64 600 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 FOXP4Q8IVH2 680 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 CCDC102AQ96A19 550 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 NBPF3Q9H094 633 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 SERPINB13Q9UIV8 391 aa23.56■■□□□ 1.36
PDLIM2-221ENST00000622702 SMIM22K7EJ46 135 aa23.55■■□□□ 1.36
PDLIM2-221ENST00000622702 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
PDLIM2-221ENST00000622702 SIPA1L1O43166 1804 aa23.55■■□□□ 1.36
PDLIM2-221ENST00000622702 AOC2O75106 756 aa23.54■■□□□ 1.36
PDLIM2-221ENST00000622702 SLC3A2P08195 630 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-221ENST00000622702 TSGA10IPQ3SY00 556 aa23.54■■□□□ 1.36
PDLIM2-221ENST00000622702 ANKRD13AQ8IZ07 590 aa23.54■■□□□ 1.36
PDLIM2-221ENST00000622702 CLMNQ96JQ2 1002 aa23.54■■□□□ 1.36
PDLIM2-221ENST00000622702 HERC5Q9UII4 1024 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-221ENST00000622702 OTOFQ9HC10 1997 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 TBC1D12O60347 775 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 SLC10A3P09131 477 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 PCP11498 1178 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 MAP3K10Q02779 954 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 CTDSPL2Q05D32 466 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 C16orf86Q6ZW13 317 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 RASAL3Q86YV0 1011 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 TBC1D10CQ8IV04 446 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 ZNF341Q9BYN7 854 aa23.53■■□□□ 1.36
PDLIM2-221ENST00000622702 UNCXA6NJT0 531 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 FGRP09769 529 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 AKNAD1Q5T1N1 836 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 RASEFQ8IZ41 740 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.52■■□□□ 1.369e-7■□□□□ 8.4
PDLIM2-221ENST00000622702 STAG1Q8WVM7 1258 aa23.52■■□□□ 1.36
PDLIM2-221ENST00000622702 SLC10A4Q96EP9 437 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms