RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CAPNS2Q96L46 248 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 WRNIP1Q96S55 665 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 ZNF341Q9BYN7 854 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 IL25Q9H293 177 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 ATP8A2Q9NTI2 1148 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 SLC10A3P09131 477 aa17.2■□□□□ 0.34
CBWD3-217ENST00000621474 ANKRD13AQ8IZ07 590 aa17.2■□□□□ 0.34
CBWD3-217ENST00000621474 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
CBWD3-217ENST00000621474 MCM9Q9NXL9 1143 aa17.2■□□□□ 0.34
CBWD3-217ENST00000621474 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
CBWD3-217ENST00000621474 MYH8P13535 1937 aa17.19■□□□□ 0.34
CBWD3-217ENST00000621474 UNCXA6NJT0 531 aa17.19■□□□□ 0.34
CBWD3-217ENST00000621474 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-217ENST00000621474 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
CBWD3-217ENST00000621474 ZKSCAN4Q969J2 545 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-217ENST00000621474 ZIC5Q96T25 663 aa17.19■□□□□ 0.34
CBWD3-217ENST00000621474 SNCAIPQ9Y6H5 919 aa17.19■□□□□ 0.34
CBWD3-217ENST00000621474 CYP2D6P10635 497 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 MAP3K9P80192 1104 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 GABPAQ06546 454 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 VPS53Q5VIR6 699 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 EHD4Q9H223 541 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
CBWD3-217ENST00000621474 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 GJA5P36382 358 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 PAXIP1Q6ZW49 1069 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-217ENST00000621474 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
CBWD3-217ENST00000621474 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
CBWD3-217ENST00000621474 PTPRFP10586 1907 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 USP17L12C9JPN9 530 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 USP17L21D6R901 530 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 AOC2O75106 756 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 GNAT2P19087 354 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 GRM1Q13255 1194 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 NOL9Q5SY16 702 aaKnown RBP17.17■□□□□ 0.34
CBWD3-217ENST00000621474 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
CBWD3-217ENST00000621474 FOXP4Q8IVH2 680 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-217ENST00000621474 ELP3Q9H9T3 547 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 SERPINB13Q9UIV8 391 aa17.17■□□□□ 0.34
CBWD3-217ENST00000621474 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
CBWD3-217ENST00000621474 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
CBWD3-217ENST00000621474 CHMLP26374 656 aa17.16■□□□□ 0.34
CBWD3-217ENST00000621474 ECE1P42892 770 aa17.16■□□□□ 0.34
CBWD3-217ENST00000621474 C12orf60Q5U649 245 aa17.16■□□□□ 0.34
CBWD3-217ENST00000621474 TTC6Q86TZ1 520 aa17.16■□□□□ 0.34
CBWD3-217ENST00000621474 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
CBWD3-217ENST00000621474 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-217ENST00000621474 JAG1P78504 1218 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-217ENST00000621474 TATDN1Q6P1N9 297 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 CCDC102AQ96A19 550 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 SLC10A4Q96EP9 437 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 DIAPH3Q9NSV4 1193 aa17.15■□□□□ 0.34
CBWD3-217ENST00000621474 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-217ENST00000621474 HIP1O00291 1037 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 SHMT1P34896 483 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 SBK1Q52WX2 424 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 SPRYD7Q5W111 196 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 OPTNQ96CV9 577 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-217ENST00000621474 CSADQ9Y600 493 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 ROBO3Q96MS0 1386 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 SPDYE5A6NIY4 337 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 CTNND1O60716 968 aaKnown RBP17.14■□□□□ 0.33
CBWD3-217ENST00000621474 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
CBWD3-217ENST00000621474 CAP2P40123 477 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 NOGQ13253 232 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 SCYL3Q8IZE3 742 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-217ENST00000621474 DYNLL2Q96FJ2 89 aa17.14■□□□□ 0.33
CBWD3-217ENST00000621474 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-217ENST00000621474 LAMA4Q16363 1823 aa17.13■□□□□ 0.33
CBWD3-217ENST00000621474 APPP05067 770 aa17.13■□□□□ 0.33
CBWD3-217ENST00000621474 ZBTB48P10074 688 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-217ENST00000621474 MKRN3Q13064 507 aaKnown RBP17.13■□□□□ 0.33
CBWD3-217ENST00000621474 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-217ENST00000621474 PTPRAP18433 802 aa17.12■□□□□ 0.33
CBWD3-217ENST00000621474 MAP2K2P36507 400 aa17.12■□□□□ 0.33
CBWD3-217ENST00000621474 TDO2P48775 406 aa17.12■□□□□ 0.33
CBWD3-217ENST00000621474 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
CBWD3-217ENST00000621474 CCDC84Q86UT8 332 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-217ENST00000621474 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
CBWD3-217ENST00000621474 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
CBWD3-217ENST00000621474 IRF6O14896 467 aa17.11■□□□□ 0.33
CBWD3-217ENST00000621474 GDF11O95390 407 aa17.11■□□□□ 0.33
CBWD3-217ENST00000621474 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-217ENST00000621474 OTUD5Q96G74 571 aa17.11■□□□□ 0.33
CBWD3-217ENST00000621474 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
CBWD3-217ENST00000621474 ZMYM6O95789 1325 aa17.11■□□□□ 0.33
CBWD3-217ENST00000621474 RAD50Q92878 1312 aa17.11■□□□□ 0.33
CBWD3-217ENST00000621474 FGAP02671 866 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms