RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ZSWIM5Q9P217 1185 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 MROH7-TTC4A0A0A0MT08 1334 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 ZFYP08048 801 aaPredicted RBP12.23□□□□□ -0.45
CDH1-214ENST00000621016 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
CDH1-214ENST00000621016 CNNM3Q8NE01 707 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 SRCAPQ6ZRS2 3230 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 GRIN1Q05586 938 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 NR5A1Q13285 461 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 STAMQ92783 540 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 DPF2Q92785 391 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 SLAIN2Q9P270 581 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 CIAO1O76071 339 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 CTSWP56202 376 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 UBASH3AP57075 661 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 TPM4P67936 248 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 CCAR2Q8N163 923 aaKnown RBP12.22□□□□□ -0.45
CDH1-214ENST00000621016 CPLX3Q8WVH0 158 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 PICK1Q9NRD5 415 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 JCADQ9P266 1359 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
CDH1-214ENST00000621016 CASP1P29466 404 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 ADD2P35612 726 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 ATP2B2Q01814 1243 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.22□□□□□ -0.45
CDH1-214ENST00000621016 BORCS6Q96GS4 357 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 MRFAP1L1Q96HT8 127 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 RABEP2Q9H5N1 569 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 SLC4A4Q9Y6R1 1079 aa12.22□□□□□ -0.45
CDH1-214ENST00000621016 CYP2D7A0A087X1C5 515 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 PDE8BO95263 885 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
CDH1-214ENST00000621016 AGXT2Q9BYV1 514 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 FANCLQ9NW38 375 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 C5P01031 1676 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 TMEM232C9JQI7 657 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 PAX7P23759 505 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 CCZ1BP86790 482 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 CCZ1P86791 482 aaPredicted RBP12.21□□□□□ -0.45
CDH1-214ENST00000621016 FANCCQ00597 558 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 GIGYF2Q6Y7W6 1299 aaKnown RBP12.21□□□□□ -0.45
CDH1-214ENST00000621016 NBPF11Q86T75 865 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 DNAI1Q9UI46 699 aa12.21□□□□□ -0.45
CDH1-214ENST00000621016 AFMP43652 599 aa12.21□□□□□ -0.46
CDH1-214ENST00000621016 STX17P56962 302 aa12.21□□□□□ -0.46
CDH1-214ENST00000621016 ARMCX5Q6P1M9 558 aa12.21□□□□□ -0.46
CDH1-214ENST00000621016 SHC4Q6S5L8 630 aa12.21□□□□□ -0.46
CDH1-214ENST00000621016 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.46
CDH1-214ENST00000621016 PHACTR2O75167 634 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 RASGRF1Q13972 1273 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 SLC4A9Q96Q91 983 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 OVOS2A0A0G2JMS6 1433 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
CDH1-214ENST00000621016 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
CDH1-214ENST00000621016 CAVIN2O95810 425 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
CDH1-214ENST00000621016 MUM1L1Q5H9M0 696 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 LEKR1Q6ZMV7 388 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 USP49Q70CQ1 688 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 IFNL3Q8IZI9 196 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 SPATA5Q8NB90 893 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 JPH2Q9BR39 696 aaPredicted RBP12.2□□□□□ -0.46
CDH1-214ENST00000621016 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 MED4Q9NPJ6 270 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 BAZ2BQ9UIF8 2168 aaKnown RBP12.2□□□□□ -0.46
CDH1-214ENST00000621016 MAP3K15Q6ZN16 1313 aa12.2□□□□□ -0.46
CDH1-214ENST00000621016 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
CDH1-214ENST00000621016 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
CDH1-214ENST00000621016 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 CABP5Q9NP86 173 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 KCNH3Q9ULD8 1083 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 MST1RQ04912 1400 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 URI1O94763 535 aaPredicted RBP12.19□□□□□ -0.46
CDH1-214ENST00000621016 MAGEA9P43362 315 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 SLC39A14Q15043 492 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 SAFBQ15424 915 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDH1-214ENST00000621016 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 ERICH2A1L162 156 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 LIG3P49916 1009 aa12.19□□□□□ -0.46
CDH1-214ENST00000621016 ADKP55263 362 aaKnown RBP12.19□□□□□ -0.46
CDH1-214ENST00000621016 MNS1Q8NEH6 495 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms