RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RILPL2Q969X0 211 aa21.99■■□□□ 1.11
LITAF-220ENST00000620789 STRBPQ96SI9 672 aaKnown RBP21.99■■□□□ 1.11
LITAF-220ENST00000620789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.99■■□□□ 1.113e-7■■■□□ 18
LITAF-220ENST00000620789 ATP8A2Q9NTI2 1148 aa21.99■■□□□ 1.11
LITAF-220ENST00000620789 FAM196BA6NMK8 535 aa21.98■■□□□ 1.11
LITAF-220ENST00000620789 M0R2C6 588 aa21.98■■□□□ 1.11
LITAF-220ENST00000620789 MKRN3Q13064 507 aaKnown RBP21.98■■□□□ 1.11
LITAF-220ENST00000620789 SLC4A8Q2Y0W8 1093 aa21.98■■□□□ 1.11
LITAF-220ENST00000620789 NOL9Q5SY16 702 aaKnown RBP21.98■■□□□ 1.11
LITAF-220ENST00000620789 METTL16Q86W50 562 aaKnown RBP21.98■■□□□ 1.11
LITAF-220ENST00000620789 FOXP4Q8IVH2 680 aaPredicted RBP21.98■■□□□ 1.11
LITAF-220ENST00000620789 OPTNQ96CV9 577 aa21.98■■□□□ 1.11
LITAF-220ENST00000620789 SLC4A4Q9Y6R1 1079 aa21.98■■□□□ 1.11
LITAF-220ENST00000620789 GPAA1O43292 621 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 GJA5P36382 358 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 TTC6Q86TZ1 520 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 CRACR2BQ8N4Y2 399 aaPredicted RBP21.97■■□□□ 1.11
LITAF-220ENST00000620789 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
LITAF-220ENST00000620789 WBP1LQ9NX94 342 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 MCM9Q9NXL9 1143 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 LAMB1P07942 1786 aa21.97■■□□□ 1.11
LITAF-220ENST00000620789 SPDYE5A6NIY4 337 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 TTC22Q5TAA0 569 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 ERO1BQ86YB8 467 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 REM2Q8IYK8 340 aaPredicted RBP21.96■■□□□ 1.11
LITAF-220ENST00000620789 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 TRIM34Q9BYJ4 488 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 EHD4Q9H223 541 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 DNAJC18Q9H819 358 aa21.96■■□□□ 1.11
LITAF-220ENST00000620789 CTNND1O60716 968 aaKnown RBP21.95■■□□□ 1.1
LITAF-220ENST00000620789 POLR3DP05423 398 aaPredicted RBP21.95■■□□□ 1.1
LITAF-220ENST00000620789 GNAT2P19087 354 aa21.95■■□□□ 1.1
LITAF-220ENST00000620789 SCYL3Q8IZE3 742 aa21.95■■□□□ 1.1
LITAF-220ENST00000620789 OTUD5Q96G74 571 aa21.95■■□□□ 1.1
LITAF-220ENST00000620789 DDRGK1Q96HY6 314 aa21.95■■□□□ 1.1
LITAF-220ENST00000620789 SERPINB13Q9UIV8 391 aa21.95■■□□□ 1.1
LITAF-220ENST00000620789 DOCK1Q14185 1865 aa21.94■■□□□ 1.1
LITAF-220ENST00000620789 HSPA1AP0DMV8 641 aaKnown RBP21.94■■□□□ 1.1
LITAF-220ENST00000620789 HSPA1BP0DMV9 641 aaKnown RBP21.94■■□□□ 1.1
LITAF-220ENST00000620789 GSPT1P15170 499 aaKnown RBP21.94■■□□□ 1.1
LITAF-220ENST00000620789 PLCD1P51178 756 aa21.94■■□□□ 1.1
LITAF-220ENST00000620789 BAZ2AQ9UIF9 1905 aaKnown RBP21.94■■□□□ 1.1
LITAF-220ENST00000620789 GSG1L2A8MUP6 293 aa21.93■■□□□ 1.1
LITAF-220ENST00000620789 PPATQ06203 517 aa21.93■■□□□ 1.1
LITAF-220ENST00000620789 SREBF2Q12772 1141 aa21.93■■□□□ 1.1
LITAF-220ENST00000620789 PICK1Q9NRD5 415 aa21.93■■□□□ 1.1
LITAF-220ENST00000620789 HELLSQ9NRZ9 838 aa21.93■■□□□ 1.1
LITAF-220ENST00000620789 MANSC4A6NHS7 340 aaPredicted RBP21.92■■□□□ 1.1
LITAF-220ENST00000620789 SDSP20132 328 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 CAP2P40123 477 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 PPIL2Q13356 520 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 RRP1BQ14684 758 aaKnown RBP21.92■■□□□ 1.1
LITAF-220ENST00000620789 GIMAP6Q6P9H5 292 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 AMOTL1Q8IY63 956 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 FAM227BQ96M60 508 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 BEGAINQ9BUH8 593 aa21.92■■□□□ 1.1
LITAF-220ENST00000620789 A0A0D9SFI3 127 aa21.91■■□□□ 1.1
LITAF-220ENST00000620789 USP17L12C9JPN9 530 aa21.91■■□□□ 1.1
LITAF-220ENST00000620789 USP17L21D6R901 530 aa21.91■■□□□ 1.1
LITAF-220ENST00000620789 CYP2D6P10635 497 aa21.91■■□□□ 1.1
LITAF-220ENST00000620789 TM4SF4P48230 202 aa21.91■■□□□ 1.1
LITAF-220ENST00000620789 NMIQ13287 307 aaPredicted RBP21.91■■□□□ 1.1
LITAF-220ENST00000620789 ATAD5Q96QE3 1844 aa21.91■■□□□ 1.1
LITAF-220ENST00000620789 PATL2C9JE40 543 aaKnown RBP21.9■■□□□ 1.1
LITAF-220ENST00000620789 IRF6O14896 467 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 PTPRAP18433 802 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 GTF2A2P52657 109 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 INHBEP58166 350 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 EVX2Q03828 476 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 GABPAQ06546 454 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 MCMDC2Q4G0Z9 681 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 C12orf60Q5U649 245 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 TATDN1Q6P1N9 297 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 CTR9Q6PD62 1173 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 MS4A4AQ96JQ5 239 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 EPB41L4AQ9HCS5 686 aaPredicted RBP21.9■■□□□ 1.1
LITAF-220ENST00000620789 PPP4R2Q9NY27 417 aa21.9■■□□□ 1.1
LITAF-220ENST00000620789 ARPP21Q9UBL0 812 aaPredicted RBP21.9■■□□□ 1.1
LITAF-220ENST00000620789 HIP1O00291 1037 aa21.89■■□□□ 1.09
LITAF-220ENST00000620789 APPP05067 770 aa21.89■■□□□ 1.09
LITAF-220ENST00000620789 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.09
LITAF-220ENST00000620789 TAOK2Q9UL54 1235 aa21.89■■□□□ 1.09
LITAF-220ENST00000620789 CYP2D7A0A087X1C5 515 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 TESPA1A2RU30 521 aaPredicted RBP21.88■■□□□ 1.09
LITAF-220ENST00000620789 FOXN1O15353 648 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 CA12O43570 354 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 SHMT1P34896 483 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 TDO2P48775 406 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 SNAPC2Q13487 334 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 SBK1Q52WX2 424 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 IFNL3Q8IZI9 196 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 NACAP1Q9BZK3 213 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.88■■□□□ 1.09
LITAF-220ENST00000620789 KCNH4Q9UQ05 1017 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 ZHX2Q9Y6X8 837 aa21.88■■□□□ 1.09
LITAF-220ENST00000620789 PHIPQ8WWQ0 1821 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 GDF11O95390 407 aa21.87■■□□□ 1.09
LITAF-220ENST00000620789 ASNSP08243 561 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms