RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
TARDBP-223ENST00000620632 CRNKL1Q9BZJ0 848 aaKnown RBP13.01□□□□□ -0.33
TARDBP-223ENST00000620632 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-223ENST00000620632 A0A0D9SFI3 127 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 FOXP2O15409 715 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 TBC1D12O60347 775 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 CYP2D6P10635 497 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 PLCD1P51178 756 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 SHROOM1Q2M3G4 852 aaPredicted RBP13□□□□□ -0.33
TARDBP-223ENST00000620632 SPRYD7Q5W111 196 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 CCDC129Q6ZRS4 1044 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
TARDBP-223ENST00000620632 CCDC102AQ96A19 550 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 AIDAQ96BJ3 306 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 HOOK2Q96ED9 719 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 WNK4Q96J92 1243 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 FAM227BQ96M60 508 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 DHX36Q9H2U1 1008 aaKnown RBP13□□□□□ -0.33
TARDBP-223ENST00000620632 EPB41L4AQ9HCS5 686 aaPredicted RBP13□□□□□ -0.33
TARDBP-223ENST00000620632 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
TARDBP-223ENST00000620632 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
TARDBP-223ENST00000620632 CYP2D7A0A087X1C5 515 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 UNCXA6NJT0 531 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 GSG1L2A8MUP6 293 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 JAG1P78504 1218 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-223ENST00000620632 NOGQ13253 232 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 SLC10A4Q96EP9 437 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
TARDBP-223ENST00000620632 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
TARDBP-223ENST00000620632 SDSP20132 328 aa12.98□□□□□ -0.33
TARDBP-223ENST00000620632 MAP2K2P36507 400 aa12.98□□□□□ -0.33
TARDBP-223ENST00000620632 NMIQ13287 307 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-223ENST00000620632 NOL9Q5SY16 702 aaKnown RBP12.98□□□□□ -0.33
TARDBP-223ENST00000620632 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-223ENST00000620632 CCDC84Q86UT8 332 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-223ENST00000620632 MCM9Q9NXL9 1143 aa12.98□□□□□ -0.33
TARDBP-223ENST00000620632 CSADQ9Y600 493 aa12.98□□□□□ -0.33
TARDBP-223ENST00000620632 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 GABPAQ06546 454 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
TARDBP-223ENST00000620632 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 SLC44A5Q8NCS7 719 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 IL25Q9H293 177 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
TARDBP-223ENST00000620632 HERC5Q9UII4 1024 aaKnown RBP12.97□□□□□ -0.33
TARDBP-223ENST00000620632 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-223ENST00000620632 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 USP17L21D6R901 530 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-223ENST00000620632 HLA-DOAP06340 250 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 HSPA1AP0DMV8 641 aaKnown RBP12.96□□□□□ -0.33
TARDBP-223ENST00000620632 HSPA1BP0DMV9 641 aaKnown RBP12.96□□□□□ -0.33
TARDBP-223ENST00000620632 ZBTB48P10074 688 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-223ENST00000620632 SHMT1P34896 483 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-223ENST00000620632 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 EHD4Q9H223 541 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 WBP1LQ9NX94 342 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 SERPINB13Q9UIV8 391 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 LAMA4Q16363 1823 aa12.96□□□□□ -0.33
TARDBP-223ENST00000620632 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
TARDBP-223ENST00000620632 IRF6O14896 467 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
TARDBP-223ENST00000620632 GDF11O95390 407 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 PTPRAP18433 802 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 CAP2P40123 477 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 C12orf60Q5U649 245 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 TATDN1Q6P1N9 297 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 TTC6Q86TZ1 520 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 ERO1BQ86YB8 467 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 CRACR2BQ8N4Y2 399 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-223ENST00000620632 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
TARDBP-223ENST00000620632 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 FOXN1O15353 648 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 GNAT2P19087 354 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 PPIL2Q13356 520 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 CWC27Q6UX04 472 aaKnown RBP12.94□□□□□ -0.34
TARDBP-223ENST00000620632 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 IFNL3Q8IZI9 196 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 PTPN18Q99952 460 aa12.94□□□□□ -0.34
TARDBP-223ENST00000620632 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
TARDBP-223ENST00000620632 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-223ENST00000620632 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
TARDBP-223ENST00000620632 TM4SF4P48230 202 aa12.93□□□□□ -0.34
TARDBP-223ENST00000620632 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-223ENST00000620632 PPATQ06203 517 aa12.93□□□□□ -0.34
TARDBP-223ENST00000620632 SBK1Q52WX2 424 aa12.93□□□□□ -0.34
TARDBP-223ENST00000620632 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
TARDBP-223ENST00000620632 BRI3BPQ8WY22 251 aa12.93□□□□□ -0.34
TARDBP-223ENST00000620632 ARPP21Q9UBL0 812 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms