RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 ZNF589Q86UQ0 364 aaPredicted RBP12.46□□□□□ -0.41
NBPF3-213ENST00000619554 GLIS2Q9BZE0 524 aaPredicted RBP12.46□□□□□ -0.41
NBPF3-213ENST00000619554 TMEM39BQ9GZU3 492 aa12.46□□□□□ -0.41
NBPF3-213ENST00000619554 NAPBQ9H115 298 aa12.46□□□□□ -0.41
NBPF3-213ENST00000619554 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
NBPF3-213ENST00000619554 LMBRD1Q9NUN5 540 aa12.46□□□□□ -0.41
NBPF3-213ENST00000619554 SAP30BPQ9UHR5 308 aaKnown RBP12.46□□□□□ -0.41
NBPF3-213ENST00000619554 ADM5C9JUS6 153 aa12.46□□□□□ -0.42
NBPF3-213ENST00000619554 CSRNP1Q96S65 589 aa12.46□□□□□ -0.42
NBPF3-213ENST00000619554 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.42
NBPF3-213ENST00000619554 ANO2Q9NQ90 1003 aa12.46□□□□□ -0.42
NBPF3-213ENST00000619554 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.42
NBPF3-213ENST00000619554 SCN4AP35499 1836 aa12.46□□□□□ -0.42
NBPF3-213ENST00000619554 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
NBPF3-213ENST00000619554 HSPD1P10809 573 aaKnown RBP12.45□□□□□ -0.42
NBPF3-213ENST00000619554 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
NBPF3-213ENST00000619554 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
NBPF3-213ENST00000619554 PI4KBQ9UBF8 816 aa12.45□□□□□ -0.42
NBPF3-213ENST00000619554 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
NBPF3-213ENST00000619554 OFD1O75665 1012 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
NBPF3-213ENST00000619554 FSTL1Q12841 308 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 ZFPM1Q8IX07 1006 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 CRACR2BQ8N4Y2 399 aaPredicted RBP12.44□□□□□ -0.42
NBPF3-213ENST00000619554 IL17RAQ96F46 866 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 CDCA5Q96FF9 252 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 PDLIM2Q96JY6 352 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 ZNF408Q9H9D4 720 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
NBPF3-213ENST00000619554 PALD1Q9ULE6 856 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 USP17L21D6R901 530 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 PPP1R12BO60237 982 aaPredicted RBP12.44□□□□□ -0.42
NBPF3-213ENST00000619554 MCM5P33992 734 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 VPS53Q5VIR6 699 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 PRAMEF18Q5VWM3 479 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
NBPF3-213ENST00000619554 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
NBPF3-213ENST00000619554 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 TRAF5O00463 557 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 TTLL12Q14166 644 aaPredicted RBP12.43□□□□□ -0.42
NBPF3-213ENST00000619554 ALX1Q15699 326 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 SLC4A8Q2Y0W8 1093 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 ZSCAN23Q3MJ62 389 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
NBPF3-213ENST00000619554 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
NBPF3-213ENST00000619554 DDTLA6NHG4 134 aaPredicted RBP12.42□□□□□ -0.42
NBPF3-213ENST00000619554 FGAP02671 866 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
NBPF3-213ENST00000619554 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 NBPF12Q5TAG4 269 aaPredicted RBP12.42□□□□□ -0.42
NBPF3-213ENST00000619554 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
NBPF3-213ENST00000619554 IL25Q9H293 177 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
NBPF3-213ENST00000619554 SERPINB13Q9UIV8 391 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 MAST2Q6P0Q8 1798 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 ZNF646O15015 1829 aaPredicted RBP12.42□□□□□ -0.42
NBPF3-213ENST00000619554 MYH2Q9UKX2 1941 aa12.42□□□□□ -0.42
NBPF3-213ENST00000619554 ZNF213O14771 459 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 ZNF500O60304 480 aaPredicted RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 CELF2O95319 508 aaKnown RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 ANAPC15P60006 121 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 C2orf69Q8N8R5 385 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 TEPSINQ96N21 525 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 EPB41L4AQ9HCS5 686 aaPredicted RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 HERC5Q9UII4 1024 aaKnown RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 NOL7Q9UMY1 257 aaKnown RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 DOCK2Q92608 1830 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 MBD3O95983 291 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 MSNP26038 577 aaKnown RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 MIGA2Q7L4E1 593 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 ARMC9Q7Z3E5 817 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
NBPF3-213ENST00000619554 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 ATRNL1Q5VV63 1379 aa12.41□□□□□ -0.42
NBPF3-213ENST00000619554 CYP2D6P10635 497 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 IREB2P48200 963 aaKnown RBP12.4□□□□□ -0.42
NBPF3-213ENST00000619554 PLCD1P51178 756 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 PTH1RQ03431 593 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 PDE4BQ07343 736 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 PPARAQ07869 468 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 CUL4AQ13619 759 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 PRKG1Q13976 671 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 RNF20Q5VTR2 975 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 DLK2Q6UY11 383 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 MAP4K1Q92918 833 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 ZNF341Q9BYN7 854 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 LSG1Q9H089 658 aaKnown RBP12.4□□□□□ -0.42
NBPF3-213ENST00000619554 EHD4Q9H223 541 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 MKNK2Q9HBH9 465 aa12.4□□□□□ -0.42
NBPF3-213ENST00000619554 ZMYM6O95789 1325 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms