RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 FLT3LGP49771 235 aa11.24□□□□□ -0.61
SYN3-213ENST00000619146 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
SYN3-213ENST00000619146 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
SYN3-213ENST00000619146 AKAP2Q9Y2D5 859 aa11.24□□□□□ -0.61
SYN3-213ENST00000619146 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
SYN3-213ENST00000619146 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 BCRP11274 1271 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
SYN3-213ENST00000619146 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 HOOK2Q96ED9 719 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 PARK7Q99497 189 aaKnown RBP11.23□□□□□ -0.61
SYN3-213ENST00000619146 GPR108Q9NPR9 543 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
SYN3-213ENST00000619146 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
SYN3-213ENST00000619146 IFIT2P09913 472 aaKnown RBP11.22□□□□□ -0.61
SYN3-213ENST00000619146 TFCP2Q12800 502 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 AACSQ86V21 672 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 DEFB123Q8N688 67 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 RPAP1Q9BWH6 1393 aaPredicted RBP11.22□□□□□ -0.61
SYN3-213ENST00000619146 IL1RAPL2Q9NP60 686 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 ZHX2Q9Y6X8 837 aa11.22□□□□□ -0.61
SYN3-213ENST00000619146 TRIM75PA6NK02 468 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 SMARCA5O60264 1052 aaPredicted RBP11.21□□□□□ -0.61
SYN3-213ENST00000619146 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 ANKRD13CQ8N6S4 541 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 VGLL2Q8N8G2 317 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 ZNF112Q9UJU3 913 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
SYN3-213ENST00000619146 SIPA1L1O43166 1804 aa11.21□□□□□ -0.62
SYN3-213ENST00000619146 MAST3O60307 1309 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
SYN3-213ENST00000619146 PDE8BO95263 885 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 MX1P20591 662 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 PDE4AP27815 886 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 PRDX5P30044 214 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 RGS3P49796 1198 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 TRIM32Q13049 653 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
SYN3-213ENST00000619146 FKBP1CQ5VVH2 108 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 HHIPL2Q6UWX4 724 aa11.2□□□□□ -0.62
SYN3-213ENST00000619146 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
SYN3-213ENST00000619146 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
SYN3-213ENST00000619146 MYH1P12882 1939 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 PDE1AP54750 535 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
SYN3-213ENST00000619146 NECAB2Q7Z6G3 386 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 LPIN2Q92539 896 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 EAF2Q96CJ1 260 aaPredicted RBP11.19□□□□□ -0.62
SYN3-213ENST00000619146 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYN3-213ENST00000619146 BCL11AQ9H165 835 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 OSBPL3Q9H4L5 887 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 FOCADQ5VW36 1801 aa11.19□□□□□ -0.62
SYN3-213ENST00000619146 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 VCANP13611 3396 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 A0A0G2JLL6 359 aaPredicted RBP11.18□□□□□ -0.62
SYN3-213ENST00000619146 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 PHF20L1A8MW92 1017 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 ERC2O15083 957 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 PEX10O60683 326 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 IFIT1P09914 478 aaKnown RBP11.18□□□□□ -0.62
SYN3-213ENST00000619146 SLC5A1P13866 664 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 PTPRAP18433 802 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 MAGEA10P43363 369 aaPredicted RBP11.18□□□□□ -0.62
SYN3-213ENST00000619146 PICALMQ13492 652 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 TREML2Q5T2D2 321 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 PRRT2Q7Z6L0 340 aaPredicted RBP11.18□□□□□ -0.62
SYN3-213ENST00000619146 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 GDF15Q99988 308 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 PAK6Q9NQU5 681 aaPredicted RBP11.18□□□□□ -0.62
SYN3-213ENST00000619146 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
SYN3-213ENST00000619146 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 CXCL11O14625 94 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 GLRX3O76003 335 aaKnown RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 BMP2KLQ5H9B9 411 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 SKAP1Q86WV1 359 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 COA7Q96BR5 231 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms