RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 PRKRIP1Q9H875 184 aaPredicted RBP9.76□□□□□ -0.85
CBWD1-227ENST00000618361 GAKO14976 1311 aa9.76□□□□□ -0.85
CBWD1-227ENST00000618361 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
CBWD1-227ENST00000618361 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
CBWD1-227ENST00000618361 NBPF7P0C2Y1 421 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 SLC5A1P13866 664 aa9.75□□□□□ -0.85
CBWD1-227ENST00000618361 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
CBWD1-227ENST00000618361 ZGPATQ8N5A5 531 aaKnown RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
CBWD1-227ENST00000618361 FAM163AQ96GL9 167 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 BICC1Q9H694 974 aaKnown RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 GNL3LQ9NVN8 582 aaKnown RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 DDX60LQ5H9U9 1706 aaKnown RBP9.75□□□□□ -0.85
CBWD1-227ENST00000618361 VCANP13611 3396 aa9.75□□□□□ -0.85
CBWD1-227ENST00000618361 TMEM265A0A087WTH1 108 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 DDTLA6NHG4 134 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 ZKSCAN1P17029 563 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 CYP2B6P20813 491 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 MAPK4P31152 587 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 HOXA7P31268 230 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 PLA2G5P39877 138 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 SMAD3P84022 425 aaKnown RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 CACNB2Q08289 660 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 SPP2Q13103 211 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 DDX10Q13206 875 aaKnown RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 TJAP1Q5JTD0 557 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 POTEHQ6S545 545 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 WDR63Q8IWG1 891 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 USP6NLQ92738 828 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 ASCC2Q9H1I8 757 aaPredicted RBP9.74□□□□□ -0.85
CBWD1-227ENST00000618361 DENND2AQ9ULE3 1009 aa9.74□□□□□ -0.85
CBWD1-227ENST00000618361 EYA2O00167 538 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 MSCO60682 206 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 RGS2P41220 211 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 PDE3AQ14432 1141 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 SLC4A10Q6U841 1118 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 ANKRD44Q8N8A2 993 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 GPRC5AQ8NFJ5 357 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 GTF3C2Q8WUA4 911 aaPredicted RBP9.73□□□□□ -0.85
CBWD1-227ENST00000618361 AS3MTQ9HBK9 375 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 CACNA1FO60840 1977 aa9.73□□□□□ -0.85
CBWD1-227ENST00000618361 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
CBWD1-227ENST00000618361 FOSL2P15408 326 aa9.72□□□□□ -0.85
CBWD1-227ENST00000618361 CCND3P30281 292 aaPredicted RBP9.72□□□□□ -0.85
CBWD1-227ENST00000618361 CAP2P40123 477 aa9.72□□□□□ -0.85
CBWD1-227ENST00000618361 HMGCS2P54868 508 aa9.72□□□□□ -0.85
CBWD1-227ENST00000618361 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
CBWD1-227ENST00000618361 MORN1Q5T089 497 aa9.72□□□□□ -0.85
CBWD1-227ENST00000618361 CCAR1Q8IX12 1150 aaKnown RBP9.72□□□□□ -0.85
CBWD1-227ENST00000618361 WDR18Q9BV38 432 aa9.72□□□□□ -0.85
CBWD1-227ENST00000618361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.72□□□□□ -0.85
CBWD1-227ENST00000618361 DDX4Q9NQI0 724 aaKnown RBP9.72□□□□□ -0.85
CBWD1-227ENST00000618361 DNM1LO00429 736 aa9.71□□□□□ -0.86
CBWD1-227ENST00000618361 IRX3P78415 501 aaPredicted RBP9.71□□□□□ -0.86
CBWD1-227ENST00000618361 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.86
CBWD1-227ENST00000618361 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.86
CBWD1-227ENST00000618361 MYLIPQ8WY64 445 aa9.71□□□□□ -0.86
CBWD1-227ENST00000618361 LPAR1Q92633 364 aa9.71□□□□□ -0.86
CBWD1-227ENST00000618361 APBA2Q99767 749 aa9.71□□□□□ -0.86
CBWD1-227ENST00000618361 SENP6Q9GZR1 1112 aaPredicted RBP9.71□□□□□ -0.86
CBWD1-227ENST00000618361 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.71□□□□□ -0.86
CBWD1-227ENST00000618361 PDS5AQ29RF7 1337 aaKnown RBP9.71□□□□□ -0.86
CBWD1-227ENST00000618361 GPR75-ASB3A0A0A6YYF3 556 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 C19orf81C9J6K1 198 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 CIAO1O76071 339 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 SLURP2P0DP57 97 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 BTDP43251 543 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 BACE1P56817 501 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 RHBDL3P58872 404 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 HERVK_113P62684 666 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 SHHQ15465 462 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 SPTY2D1Q68D10 685 aaPredicted RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 GPR142Q7Z601 462 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 DZIP1Q86YF9 867 aaKnown RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 P2RX7Q99572 595 aaKnown RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 TTYH1Q9H313 450 aaPredicted RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 GINM1Q9NU53 330 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 TMOD4Q9NZQ9 345 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 RBPJLQ9UBG7 517 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 DDX20Q9UHI6 824 aaKnown RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 HERC5Q9UII4 1024 aaKnown RBP9.7□□□□□ -0.86
CBWD1-227ENST00000618361 DOCK1Q14185 1865 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 PTPRFP10586 1907 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 TTC28Q96AY4 2481 aa9.7□□□□□ -0.86
CBWD1-227ENST00000618361 MROH7-TTC4A0A0A0MT08 1334 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 LOC285556D6RIA3 1793 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 GLRX3O76003 335 aaKnown RBP9.69□□□□□ -0.86
CBWD1-227ENST00000618361 ERVK-9P63128 1117 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 ERVK-24P63145 666 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 PICALMQ13492 652 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 ATP2B3Q16720 1220 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 MFSD14CQ5VZR4 134 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 ATG9AQ7Z3C6 839 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 PLEKHH3Q7Z736 793 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 PHIPQ8WWQ0 1821 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms