RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 MROH7-TTC4A0A0A0MT08 1334 aa19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 DHX16O60231 1041 aaKnown RBP19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 USP5P45974 858 aa19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 AKNAD1Q5T1N1 836 aa19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 FBXL16Q8N461 479 aa19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 ZNF287Q9HBT7 754 aa19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 AATFQ9NY61 560 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRAPPC3-210ENST00000617904 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 PSME4Q14997 1843 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 CA12O43570 354 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 CPA1P15085 419 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 PDCP20941 246 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 ZNF280AP59817 542 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 PPP4CP60510 307 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 RSBN1LQ6PCB5 846 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 GMLQ99445 158 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 GBA2Q9HCG7 927 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 TOMM22Q9NS69 142 aa19.74■□□□□ 0.75
TRAPPC3-210ENST00000617904 MYO5AQ9Y4I1 1855 aaKnown RBP19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 PRC1O43663 620 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 EXOSC10Q01780 885 aaKnown RBP19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 PPARAQ07869 468 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 NOGQ13253 232 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 STRIP1Q5VSL9 837 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 SYNE3Q6ZMZ3 975 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 TMTC2Q8N394 836 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 STAG1Q8WVM7 1258 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 FAM163AQ96GL9 167 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 GGA3Q9NZ52 723 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 ANAPC4Q9UJX5 808 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 JAG2Q9Y219 1238 aa19.73■□□□□ 0.75
TRAPPC3-210ENST00000617904 MINDY4BA8MYZ0 360 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 FAM155AB1AL88 458 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 FOXP2O15409 715 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 DYNLL1P63167 89 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 STOX1Q6ZVD7 989 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 C2orf69Q8N8R5 385 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 ESR2Q92731 530 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 BRF1Q92994 677 aa19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 ZNF274Q96GC6 653 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-210ENST00000617904 USP17L3A6NCW0 530 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 USP17L4A6NCW7 530 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 PRKAB2O43741 272 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 DDIT3P35638 169 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 PDE4BQ07343 736 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 SBK1Q52WX2 424 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 CPLX2Q6PUV4 134 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 USP17L1Q7RTZ2 530 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 ADGRA1Q86SQ6 560 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 EPB41L4AQ9HCS5 686 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 NAP1L2Q9ULW6 460 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC3-210ENST00000617904 MYO3BQ8WXR4 1341 aa19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 LAMA4Q16363 1823 aa19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 TOB2Q14106 344 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 SULF1Q8IWU6 871 aa19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 MB21D2Q8IYB1 491 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 SDR42E1Q8WUS8 393 aa19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 AGXT2Q9BYV1 514 aa19.7■□□□□ 0.74
TRAPPC3-210ENST00000617904 GPR75-ASB3A0A0A6YYF3 556 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 BTDP43251 543 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 HDLBPQ00341 1268 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 RAB3GAP1Q15042 981 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 CCDC178Q5BJE1 867 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 ANGEL2Q5VTE6 544 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 TEKT1Q969V4 418 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 CDCA5Q96FF9 252 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 UBAC1Q9BSL1 405 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 MRIQ9BWK5 157 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 TPCN1Q9ULQ1 816 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 ATP6V1DQ9Y5K8 247 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 CASP8AP2Q9UKL3 1982 aa19.69■□□□□ 0.74
TRAPPC3-210ENST00000617904 DDX11L8A8MPP1 907 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 USP17L8P0C7I0 530 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 HMGN5P82970 282 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 ME3Q16798 604 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 NFXL1Q6ZNB6 911 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 IQCA1Q86XH1 822 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 TBC1D10CQ8IV04 446 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 TEX11Q8IYF3 940 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 CCDC102AQ96A19 550 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 TCEANC2Q96MN5 208 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 MYOZ2Q9NPC6 264 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 MCM9Q9NXL9 1143 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 TTF2Q9UNY4 1162 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 TAF6LQ9Y6J9 622 aa19.68■□□□□ 0.74
TRAPPC3-210ENST00000617904 CCDC69A6NI79 296 aa19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 RRP12Q5JTH9 1297 aaKnown RBP19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 HHIPL2Q6UWX4 724 aa19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 GTF3C6Q969F1 213 aa19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 GAKO14976 1311 aa19.67■□□□□ 0.74
TRAPPC3-210ENST00000617904 B4E1Z4 1266 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms