RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SAR1BQ9Y6B6 198 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 IQGAP3Q86VI3 1631 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 CSB-PGBD3P0DP91 1061 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 NR1D1P20393 614 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 SEC24CP53992 1094 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 GRIK3Q13003 919 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 FAM133BQ5BKY9 247 aaKnown RBP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 SH2D4BQ5SQS7 431 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 MTRQ99707 1265 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 UBXN6Q9BZV1 441 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 VCX3BQ9H321 246 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 VCX3AQ9NNX9 186 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 RBM8AQ9Y5S9 174 aaKnown RBP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 ANP32DO95626 131 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 VIMP08670 466 aaKnown RBP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 IDEP14735 1019 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 KRT24Q2M2I5 525 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 NAA35Q5VZE5 725 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 HOOK3Q86VS8 718 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 RAB11FIP4Q86YS3 637 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 CUL5Q93034 780 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 CCT8L2Q96SF2 557 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 FTOQ9C0B1 505 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 MMADHCQ9H3L0 296 aaPredicted RBP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 FAM114A2Q9NRY5 505 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 MYO1AQ9UBC5 1043 aa8.27□□□□□ -1.09
PDE6A-205ENST00000617647 LUC7L2Q9Y383 392 aaKnown RBP8.27□□□□□ -1.09
PDE6A-205ENST00000617647 SMIM23A6NLE4 172 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 TMEM232C9JQI7 657 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 GUCY2FP51841 1108 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 VSTM4Q8IW00 320 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 DTNBP1Q96EV8 351 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 C8orf76Q96K31 380 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 IFT74Q96LB3 600 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 TEX13AQ9BXU3 409 aaPredicted RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 LRRC2Q9BYS8 371 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 SHROOM2Q13796 1616 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 A2MP01023 1474 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 CFAP74Q9C0B2 1584 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 AHCYL1O43865 530 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 OATP04181 439 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 HNRNPCP07910 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 RAB27AP51159 221 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 CCDC96Q2M329 555 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 MUM1Q2TAK8 710 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 RNF10Q8N5U6 811 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 NOA1Q8NC60 698 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 CCDC43Q96MW1 224 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 PRDM15P57071 1507 aaPredicted RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 MYOM1P52179 1685 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 N4BP3O15049 544 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 SPTLC2O15270 562 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 MRPS25P82663 173 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 HDLBPQ00341 1268 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 MTA1Q13330 715 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 DRP2Q13474 957 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 PLCB4Q15147 1175 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 C8orf74Q6P047 294 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 KCNG4Q8TDN1 519 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 NSRP1Q9H0G5 558 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 MBIPQ9NS73 344 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 PAIP2BQ9ULR5 123 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 STXBP3O00186 592 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 NBPF7P0C2Y1 421 aaPredicted RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 PAX3P23760 479 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 TMED1Q13445 227 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 SPA17Q15506 151 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 FGD4Q96M96 766 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 USP28Q96RU2 1077 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 PSMB7Q99436 277 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 NAA15Q9BXJ9 866 aaKnown RBP8.26□□□□□ -1.09
PDE6A-205ENST00000617647 EPN3Q9H201 632 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 NFE2L3Q9Y4A8 694 aa8.26□□□□□ -1.09
PDE6A-205ENST00000617647 TTC21BQ7Z4L5 1316 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 IQGAP1P46940 1657 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 MACROD2A1Z1Q3 448 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 GCOM1H8Y6P7 765 aaPredicted RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 MYZAPP0CAP1 466 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 PYGBP11216 843 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 SCNN1BP51168 640 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 HDGFP51858 240 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 HSP90AB4PQ58FF6 505 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 CNGA4Q8IV77 575 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 DRAXINQ8NBI3 349 aaPredicted RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 MSANTD4Q8NCY6 345 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 RPS6KL1Q9Y6S9 549 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 SCAF11Q99590 1463 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 ERICH2A1L162 156 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 HIP1O00291 1037 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 KRT86O43790 486 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 PPP1R37O75864 691 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 RTN3O95197 1032 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms