RNA–Protein interactions for RNA: ENST00000617346.4

RPL17-222, Transcript of ribosomal protein L17, human

TSL 5

Gene RPL17, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL17-222	ENST00000617346	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.89	□□□□□ -0.35
RPL17-222	ENST00000617346	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	TNPO2	O14787	897 aa	Known RBP	12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	UBXN2A	P68543	259 aa		12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	SPP2	Q13103	211 aa		12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	NSUN4	Q96CB9	384 aa	Known RBP	12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	GDF15	Q99988	308 aa		12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	PICK1	Q9NRD5	415 aa		12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	SMC4	Q9NTJ3	1288 aa		12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	ABCF2	Q9UG63	623 aa		12.88	□□□□□ -0.35
RPL17-222	ENST00000617346	NPM3	O75607	178 aa	Known RBP	12.87	□□□□□ -0.35
RPL17-222	ENST00000617346	HTATIP2	Q9BUP3	242 aa		12.87	□□□□□ -0.35
RPL17-222	ENST00000617346	TXNRD2	Q9NNW7	524 aa		12.87	□□□□□ -0.35
RPL17-222	ENST00000617346	ATAD5	Q96QE3	1844 aa		12.87	□□□□□ -0.35
RPL17-222	ENST00000617346	TFRC	P02786	760 aa	Known RBP	12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	MCAM	P43121	646 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	HMGCS2	P54868	508 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	MTX1	Q13505	466 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	FAM110C	Q1W6H9	321 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	SH3D19	Q5HYK7	790 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	ADGRA1	Q86SQ6	560 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	TRIB2	Q92519	343 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	GNL3L	Q9NVN8	582 aa	Known RBP	12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	CDH23	Q9H251	3354 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	PFAS	O15067	1338 aa		12.86	□□□□□ -0.35
RPL17-222	ENST00000617346	COL2A1	P02458	1487 aa	Predicted RBP	12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	PNMA6E	A0A0J9YXQ4	647 aa		12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	CAP2	P40123	477 aa		12.85	□□□□□ -0.35
RPL17-222	ENST00000617346		Q3C1V9	767 aa		12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	MAP3K21	Q5TCX8	1036 aa		12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	DZIP1	Q86YF9	867 aa	Known RBP	12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	DDX60L	Q5H9U9	1706 aa	Known RBP	12.85	□□□□□ -0.35
RPL17-222	ENST00000617346	EVI5	O60447	810 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	ARID4A	P29374	1257 aa	Predicted RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	RARS	P54136	660 aa	Known RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346		Q7L0L9	218 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	METTL16	Q86W50	562 aa	Known RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	ZNF280C	Q8ND82	737 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	USP6NL	Q92738	828 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	P2RX7	Q99572	595 aa	Known RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	6e-7	■■□□□ 14.2
RPL17-222	ENST00000617346	MORF4L1	Q9UBU8	362 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	TAOK2	Q9UL54	1235 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	NR2E3	Q9Y5X4	410 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	CDK5RAP2	Q96SN8	1893 aa		12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.84	□□□□□ -0.35
RPL17-222	ENST00000617346	SYN1	P17600	705 aa		12.83	□□□□□ -0.36
RPL17-222	ENST00000617346	SPATA5	Q8NB90	893 aa		12.83	□□□□□ -0.36
RPL17-222	ENST00000617346	RBPJL	Q9UBG7	517 aa		12.83	□□□□□ -0.36
RPL17-222	ENST00000617346	CUL9	Q8IWT3	2517 aa		12.83	□□□□□ -0.36
RPL17-222	ENST00000617346	PRUNE2	Q8WUY3	3088 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346		A0A1W2PPC1	479 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	SRGAP3	O43295	1099 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	COL6A1	P12109	1028 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	BMP8B	P34820	402 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	CCL14	Q16627	93 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	ERICH6	Q7L0X2	663 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	C7orf61	Q8IZ16	206 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	ZGPAT	Q8N5A5	531 aa	Known RBP	12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	PORCN	Q9H237	461 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	OGDHL	Q9ULD0	1010 aa		12.82	□□□□□ -0.36
RPL17-222	ENST00000617346	CNMD	O75829	334 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	HMGCR	P04035	888 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	MAGEA10	P43363	369 aa	Predicted RBP	12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	MTMR2	Q13614	643 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	MVP	Q14764	893 aa	Known RBP	12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	LHX8	Q68G74	356 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	NECAB2	Q7Z6G3	386 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	COA7	Q96BR5	231 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	WDR18	Q9BV38	432 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	SNRK	Q9NRH2	765 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	RPTOR	Q8N122	1335 aa		12.81	□□□□□ -0.36
RPL17-222	ENST00000617346	USP17L5	A8MUK1	530 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	DLL1	O00548	723 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	CYP2E1	P05181	493 aa	Predicted RBP	12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	TRIM27	P14373	513 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	CYP2B6	P20813	491 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	HOXA7	P31268	230 aa	Predicted RBP	12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	GCLC	P48506	637 aa	Predicted RBP	12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	EVX2	Q03828	476 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	CACNB2	Q08289	660 aa	Predicted RBP	12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	SLC17A8	Q8NDX2	589 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	NEUROD6	Q96NK8	337 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	API5	Q9BZZ5	524 aa	Known RBP	12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	EMILIN3	Q9NT22	766 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	1e-22	■■■□□ 16.8
RPL17-222	ENST00000617346	FOCAD	Q5VW36	1801 aa		12.8	□□□□□ -0.36
RPL17-222	ENST00000617346	GDF11	O95390	407 aa		12.79	□□□□□ -0.36
RPL17-222	ENST00000617346	IGHA2	P01877	340 aa		12.79	□□□□□ -0.36
RPL17-222	ENST00000617346	CCND3	P30281	292 aa	Predicted RBP	12.79	□□□□□ -0.36
RPL17-222	ENST00000617346	BACE1	P56817	501 aa		12.79	□□□□□ -0.36

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