RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 SKOR2Q2VWA4 1001 aaPredicted RBP9.39□□□□□ -0.91
MALAT1-208ENST00000616527 METTL24Q5JXM2 366 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 LPIN2Q92539 896 aa9.39□□□□□ -0.91
MALAT1-208ENST00000616527 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
MALAT1-208ENST00000616527 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
MALAT1-208ENST00000616527 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
MALAT1-208ENST00000616527 KAT6BQ8WYB5 2073 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 NUP98P52948 1817 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 AFF2P51816 1311 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 SLC27A2O14975 620 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 RNF113AO15541 343 aaKnown RBP9.38□□□□□ -0.91
MALAT1-208ENST00000616527 HMGB1P09429 215 aaKnown RBP9.38□□□□□ -0.91
MALAT1-208ENST00000616527 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
MALAT1-208ENST00000616527 HSPA1LP34931 641 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 ABL2P42684 1182 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
MALAT1-208ENST00000616527 ZSCAN25Q6NSZ9 544 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 RUFY3Q7L099 469 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 ADAM32Q8TC27 787 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 KCTD15Q96SI1 283 aaPredicted RBP9.38□□□□□ -0.91
MALAT1-208ENST00000616527 CDC5LQ99459 802 aaKnown RBP9.38□□□□□ -0.91
MALAT1-208ENST00000616527 NYXQ9GZU5 481 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 CNNM1Q9NRU3 951 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 AK9Q5TCS8 1911 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 NHSQ6T4R5 1651 aa9.38□□□□□ -0.91
MALAT1-208ENST00000616527 TTC39AQ5SRH9 613 aa9.37□□□□□ -0.91
MALAT1-208ENST00000616527 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
MALAT1-208ENST00000616527 MEX3CQ5U5Q3 659 aaKnown RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 PRPF40BQ6NWY9 871 aaKnown RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 TMED8Q6PL24 325 aaPredicted RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 ZNF589Q86UQ0 364 aaPredicted RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
MALAT1-208ENST00000616527 PURBQ96QR8 312 aaKnown RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 DNAJC2Q99543 621 aaKnown RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
MALAT1-208ENST00000616527 GOLGA6L22H0YM25 854 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 GOLIM4O00461 696 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 WFS1O76024 890 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 BRD1O95696 1058 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 SLC5A1P13866 664 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 IGHMBP2P38935 993 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 KCNJ4P48050 445 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 UBE3CQ15386 1083 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 SLC27A3Q5K4L6 730 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 DDX46Q7L014 1031 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 APPBP2Q92624 585 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 EDC3Q96F86 508 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 JAKMIP1Q96N16 626 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 MPHOSPH8Q99549 860 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 UPF3BQ9BZI7 483 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 PDRG1Q9NUG6 133 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
MALAT1-208ENST00000616527 ISY1Q9ULR0 285 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
MALAT1-208ENST00000616527 BCORQ6W2J9 1755 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 TERTO14746 1132 aaKnown RBP9.35□□□□□ -0.91
MALAT1-208ENST00000616527 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
MALAT1-208ENST00000616527 RPS6KB1P23443 525 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 ADORA1P30542 326 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 AK2P54819 239 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 PPP1R26Q5T8A7 1209 aaPredicted RBP9.35□□□□□ -0.91
MALAT1-208ENST00000616527 BLOC1S2Q6QNY1 142 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 FAM196AQ6ZSG2 479 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 SEPT12Q8IYM1 358 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 MEIOBQ8N635 442 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 BSDC1Q9NW68 430 aaPredicted RBP9.35□□□□□ -0.91
MALAT1-208ENST00000616527 PGPEP1Q9NXJ5 209 aa9.35□□□□□ -0.91
MALAT1-208ENST00000616527 CCNL1Q9UK58 526 aaPredicted RBP9.35□□□□□ -0.91
MALAT1-208ENST00000616527 GPR37L1O60883 481 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 UPP2O95045 317 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
MALAT1-208ENST00000616527 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
MALAT1-208ENST00000616527 UBE4AQ14139 1066 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 ADCK5Q3MIX3 580 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 TPTE2Q6XPS3 522 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 ZGPATQ8N5A5 531 aaKnown RBP9.34□□□□□ -0.91
MALAT1-208ENST00000616527 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 AGXT2Q9BYV1 514 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 MYH3P11055 1940 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 LAMB2P55268 1798 aa9.34□□□□□ -0.91
MALAT1-208ENST00000616527 MAST3O60307 1309 aa9.33□□□□□ -0.92
MALAT1-208ENST00000616527 ZMYM6O95789 1325 aa9.33□□□□□ -0.92
MALAT1-208ENST00000616527 PDS5AQ29RF7 1337 aaKnown RBP9.33□□□□□ -0.92
MALAT1-208ENST00000616527 WDR19Q8NEZ3 1342 aa9.33□□□□□ -0.92
MALAT1-208ENST00000616527 WDR33Q9C0J8 1336 aaKnown RBP9.33□□□□□ -0.92
MALAT1-208ENST00000616527 SCN7AQ01118 1682 aa9.33□□□□□ -0.92
MALAT1-208ENST00000616527 HSPD1P10809 573 aaKnown RBP9.33□□□□□ -0.92
MALAT1-208ENST00000616527 ADD2P35612 726 aa9.33□□□□□ -0.92
MALAT1-208ENST00000616527 DEKP35659 375 aaKnown RBP9.33□□□□□ -0.92
MALAT1-208ENST00000616527 MCAMP43121 646 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms