RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NRKQ7Z2Y5 1582 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 USO1O60763 962 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 CCDC172P0C7W6 258 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 ZNF174Q15697 407 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 HS2ST1Q7LGA3 356 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 CTAGE1Q96RT6 745 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 KIF2AO00139 706 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 NEMFO60524 1076 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 UVSSAQ2YD98 709 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 NSMFQ6X4W1 530 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 PIK3AP1Q6ZUJ8 805 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 N4BP3O15049 544 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 POLA2Q14181 598 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 MCTP2Q6DN12 878 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 MYL10Q9BUA6 226 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 USP8P40818 1118 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 SP4Q02446 784 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 ICA1Q05084 483 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 RC3H1Q5TC82 1133 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 CIAPIN1Q6FI81 312 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 MTERF4Q7Z6M4 381 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 CCDC112Q8NEF3 446 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 ZBTB21Q9ULJ3 1066 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 LRRC7Q96NW7 1537 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 FGAP02671 866 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 SUPT20HL1Q3ZLR7 823 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 IGKV5-2P06315 115 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 ENOX2Q16206 610 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 TBC1D9BQ66K14 1250 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 GIMAP6Q6P9H5 292 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 TAOK3Q9H2K8 898 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 SLC5A4Q9NY91 659 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 TLR7Q9NYK1 1049 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 BICDL2A1A5D9 508 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 VWA3AA6NCI4 1184 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 PHACTR2O75167 634 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 APBB1IPQ7Z5R6 666 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 CPLX3Q8WVH0 158 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 ZNF274Q96GC6 653 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 MAP7D2Q96T17 732 aa10.69□□□□□ -0.7
CLTCL1-208ENST00000615606 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 ABCB5Q2M3G0 1257 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 FERMT2Q96AC1 680 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 MED23Q9ULK4 1368 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 MYCLP12524 364 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 CCT6AP40227 531 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 USH1GQ495M9 461 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 TTC38Q5R3I4 469 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 TMED8Q6PL24 325 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 SV2BQ7L1I2 683 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 CCDC65Q8IXS2 484 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 DRC1Q96MC2 740 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 USP25Q9UHP3 1055 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 TNKSO95271 1327 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 CCNT1O60563 726 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 ADD2P35612 726 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 ANO1Q5XXA6 986 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 CPS1P31327 1500 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 SPDYE4A6NLX3 237 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 RAD17O75943 681 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 CFBP00751 764 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 PPP1R2P41236 205 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 PTH1RQ03431 593 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 TMC6Q7Z403 805 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 REXO1Q8N1G1 1221 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 IMPG2Q9BZV3 1241 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 DHX36Q9H2U1 1008 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 ELP1O95163 1332 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 CD163L1Q9NR16 1453 aa10.68□□□□□ -0.7
CLTCL1-208ENST00000615606 NOP56O00567 594 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 KIF5CO60282 957 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 DDAH1O94760 285 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 KRT40Q6A162 431 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 MARCH10Q8NA82 808 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 CSRNP1Q96S65 589 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 VWDEQ8N2E2 1590 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 CLRN2A0PK11 232 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 C21orf2O43822 256 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 TRIM28Q13263 835 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 TBC1D5Q92609 795 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 PHKBQ93100 1093 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms