RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 UBE3CQ15386 1083 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 KLHL10Q6JEL2 608 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 PIGBQ92521 554 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 ARHGEF37A1IGU5 675 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 ARHGEF35A5YM69 484 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 EIF3JO75822 258 aaKnown RBP10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 ATF7P17544 494 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 FAM160B2Q86V87 743 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 DBNDD2Q9BQY9 259 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 SSH2Q76I76 1423 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 TCP10Q12799 353 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPATA31A1Q5TZJ5 1347 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 FERMT3Q86UX7 667 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 MLXIPQ9HAP2 919 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZBTB1Q9Y2K1 713 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 EPB41P11171 864 aaKnown RBP10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 RPS6KB1P23443 525 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 ICA1Q05084 483 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 G2E3Q7L622 706 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 IQUBQ8NA54 791 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 FNBP1Q96RU3 617 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 PREX1Q8TCU6 1659 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 CDHR2Q9BYE9 1310 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 CHMLP26374 656 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 PRKG1Q13976 671 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 NT5C3AQ9H0P0 336 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 MADDQ8WXG6 1647 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 TXNRD1Q16881 649 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 ASPRV1Q53RT3 343 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
TNFRSF9-204ENST00000615230 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 TMOD1P28289 359 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 GPATCH4Q5T3I0 446 aaKnown RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 CNNM4Q6P4Q7 775 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 FBXO41Q8TF61 875 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 CCDC97Q96F63 343 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZNF341Q9BYN7 854 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 USP8P40818 1118 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 TFDP1Q14186 410 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 DPP9Q86TI2 863 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 ABCC4O15439 1325 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 PDE8BO95263 885 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPOUT1Q5T280 376 aaKnown RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZBTB8OSQ8IWT0 167 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 SMC5Q8IY18 1101 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 RNF214Q8ND24 703 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 INTS4Q96HW7 963 aaKnown RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 PAGR1Q9BTK6 254 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 HOXA7P31268 230 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 AKNAD1Q5T1N1 836 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 BEND3Q5T5X7 828 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 MTERF4Q7Z6M4 381 aaKnown RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 NCAPG2Q86XI2 1143 aa10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 FOXP4Q8IVH2 680 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF9-204ENST00000615230 UVSSAQ2YD98 709 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 SREK1Q8WXA9 508 aaKnown RBP10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 KIFC2Q96AC6 838 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 NOX5Q96PH1 765 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 COPRSQ9NQ92 184 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 MED23Q9ULK4 1368 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZAP70P43403 619 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 TIMM10P62072 90 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 MYZAPP0CAP1 466 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 MAP9Q49MG5 647 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 NSMFQ6X4W1 530 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 SNX21Q969T3 373 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 PTPRUQ92729 1446 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 ANKRD35Q8N283 1001 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPATA31A5Q5VU36 1347 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPATA31A7Q8IWB4 1347 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 NLRP10Q86W26 655 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 KIAA0825Q8IV33 1275 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
TNFRSF9-204ENST00000615230 TRPC3Q13507 836 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZSCAN10Q96SZ4 725 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 HAUS7Q99871 368 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 SPTLC2O15270 562 aa10.96□□□□□ -0.65
TNFRSF9-204ENST00000615230 XPOTO43592 962 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms