RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 EPHA10Q5JZY3 1008 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 RUFY3Q7L099 469 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 BAP1Q92560 729 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 IRAK4Q9NWZ3 460 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 MRC1P22897 1456 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 TNS3Q68CZ2 1445 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 GFRA3O60609 400 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 TPM1P09493 284 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 MAGEA9P43362 315 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 RPIAP49247 311 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 AK2P54819 239 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 PTPN12Q05209 780 aaKnown RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 PDCD2Q16342 344 aaPredicted RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 USPL1Q5W0Q7 1092 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ZNF280DQ6N043 979 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ACRBPQ8NEB7 543 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 KIF18AQ8NI77 898 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 POM121Q96HA1 1249 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 GPR108Q9NPR9 543 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 SH2B1Q9NRF2 756 aaPredicted RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 MEGF6O75095 1541 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 COL18A1P39060 1754 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 SIPA1L3O60292 1781 aaPredicted RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 SOS2Q07890 1332 aaPredicted RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 ZRANB2O95218 330 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 CSB-PGBD3P0DP91 1061 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 PSMA5P28066 241 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 USP8P40818 1118 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 NAP1L1P55209 391 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 CABP4P57796 275 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 TRIM32Q13049 653 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 SART3Q15020 963 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 CAVIN1Q6NZI2 390 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 MMS22LQ6ZRQ5 1243 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 TTC5Q8N0Z6 440 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 ZCRB1Q8TBF4 217 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 PPM1EQ8WY54 764 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 DDX17Q92841 729 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 MYD88Q99836 296 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 SH3GL3Q99963 347 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 PRKD2Q9BZL6 878 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 CCDC8Q9H0W5 538 aaPredicted RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 ATG3Q9NT62 314 aa7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 CHCHD3Q9NX63 227 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 CPSF2Q9P2I0 782 aaKnown RBP7.72□□□□□ -1.17
CDKAL1-204ENST00000613575 RGPD2P0DJD1 1756 aa7.71□□□□□ -1.17
CDKAL1-204ENST00000613575 JCADQ9P266 1359 aa7.71□□□□□ -1.17
CDKAL1-204ENST00000613575 CRYBG1Q9Y4K1 1723 aa7.71□□□□□ -1.17
CDKAL1-204ENST00000613575 CCDC171Q6TFL3 1326 aa7.71□□□□□ -1.17
CDKAL1-204ENST00000613575 KINO60870 393 aaKnown RBP7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 CAND2O75155 1236 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 MYL6BP14649 208 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 ZKSCAN1P17029 563 aaPredicted RBP7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 GYS2P54840 703 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 RWDD2BP57060 319 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 AGERQ15109 404 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 HSP90B2PQ58FF3 399 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 CREB3L3Q68CJ9 461 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 LRSAM1Q6UWE0 723 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 SYT10Q6XYQ8 523 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 BRINP3Q76B58 766 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 MTA3Q9BTC8 594 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 PDRG1Q9NUG6 133 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 FAM53CQ9NYF3 392 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 TMEM63CQ9P1W3 806 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 CYP46A1Q9Y6A2 500 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 RFX7Q2KHR2 1363 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 WDR17Q8IZU2 1322 aa7.71□□□□□ -1.18
CDKAL1-204ENST00000613575 TAF5LO75529 589 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 SMC2O95347 1197 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 ZSCAN22P10073 491 aaPredicted RBP7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 SYT1P21579 422 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 FOXO4P98177 505 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 TRIM28Q13263 835 aaKnown RBP7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 CHRNA2Q15822 529 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 ADCK5Q3MIX3 580 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 TNNI3KQ59H18 835 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 SRLQ86TD4 932 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 NME8Q8N427 588 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 KCTD17Q8N5Z5 321 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 RBSNQ9H1K0 784 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 BOLA2Q9H3K6 86 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 VEZTQ9HBM0 779 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 SPTLC3Q9NUV7 552 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 HMG20BQ9P0W2 317 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 NSFL1CQ9UNZ2 370 aaKnown RBP7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 FRMD4BQ9Y2L6 1034 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 ATP6V1DQ9Y5K8 247 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 RBM8AQ9Y5S9 174 aaKnown RBP7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 FPGT-TNNI3KV9GXZ4 949 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 MED23Q9ULK4 1368 aa7.7□□□□□ -1.18
CDKAL1-204ENST00000613575 A0A087WZG4 1122 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms