RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 HOOK2Q96ED9 719 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 DDX60LQ5H9U9 1706 aaKnown RBP13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 UNCXA6NJT0 531 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 SLC10A3P09131 477 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 SLURP2P0DP57 97 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 RASAL3Q86YV0 1011 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 ANKRD13AQ8IZ07 590 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 CLMNQ96JQ2 1002 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 ARMT1Q9H993 441 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 NAV1Q8NEY1 1877 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 AOC2O75106 756 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 MBD4O95243 580 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 ZFYP08048 801 aaPredicted RBP13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 MAP3K10Q02779 954 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 APPBP2Q92624 585 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 ZIC5Q96T25 663 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
CCL3L3-201ENST00000612839 POTEMA6NI47 508 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 USP5P45974 858 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 NOGQ13253 232 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 VGLL4Q14135 290 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 CRNKL1Q9BZJ0 848 aaKnown RBP13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 DHX36Q9H2U1 1008 aaKnown RBP13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 PALD1Q9ULE6 856 aa13.65□□□□□ -0.22
CCL3L3-201ENST00000612839 LAMB1P07942 1786 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 PHF20L1A8MW92 1017 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 PRKAB2O43741 272 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 TBC1D12O60347 775 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 MAP2K2P36507 400 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 LRRFIP1Q32MZ4 808 aaKnown RBP13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 PI4KBQ9UBF8 816 aa13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 BAZ2AQ9UIF9 1905 aaKnown RBP13.64□□□□□ -0.23
CCL3L3-201ENST00000612839 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 INPP5BP32019 993 aa13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 SLC10A4Q96EP9 437 aa13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 CCDC136Q96JN2 1154 aa13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 ELP3Q9H9T3 547 aa13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 DCP1AQ9NPI6 582 aaPredicted RBP13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
CCL3L3-201ENST00000612839 M0R2C6 588 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 ZMYM1Q5SVZ6 1142 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 SPRYD7Q5W111 196 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 METTL16Q86W50 562 aaKnown RBP13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 RILPL2Q969X0 211 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 STRBPQ96SI9 672 aaKnown RBP13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 CSADQ9Y600 493 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 DOCK1Q14185 1865 aa13.62□□□□□ -0.23
CCL3L3-201ENST00000612839 POTEFA5A3E0 1075 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 GPAA1O43292 621 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 GSPT1P15170 499 aaKnown RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 GJA5P36382 358 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 KIF23Q02241 960 aaPredicted RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 WNK4Q96J92 1243 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 ZBTB48P10074 688 aaPredicted RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 PLCD1P51178 756 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 NOL9Q5SY16 702 aaKnown RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 SKAP1Q86WV1 359 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 MCM9Q9NXL9 1143 aa13.61□□□□□ -0.23
CCL3L3-201ENST00000612839 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
CCL3L3-201ENST00000612839 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
CCL3L3-201ENST00000612839 GSG1L2A8MUP6 293 aa13.6□□□□□ -0.23
CCL3L3-201ENST00000612839 NUBP1P53384 320 aa13.6□□□□□ -0.23
CCL3L3-201ENST00000612839 MAP2K1Q02750 393 aaPredicted RBP13.6□□□□□ -0.23
CCL3L3-201ENST00000612839 RRP1BQ14684 758 aaKnown RBP13.6□□□□□ -0.23
CCL3L3-201ENST00000612839 ERICH6BQ5W0A0 696 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms