RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 CASP7P55210 303 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 UBE3BQ7Z3V4 1068 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 FAM151AQ8WW52 585 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 BADQ92934 168 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TMEM121BQ9BXQ6 578 aaPredicted RBP9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ZNF576Q9H609 170 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TMOD2Q9NZR1 351 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PRKAG2Q9UGJ0 569 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 LAS1LQ9Y4W2 734 aaKnown RBP9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 NEURL1BA8MQ27 555 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 XRCC5P13010 732 aaKnown RBP9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 RTP1P59025 263 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 RALBP1Q15311 655 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CWF19L2Q2TBE0 894 aaKnown RBP9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 FRMPD3Q5JV73 1810 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PHIPQ8WWQ0 1821 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 FAM84BQ96KN1 310 aaPredicted RBP9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 P2RX7Q99572 595 aaKnown RBP9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 C11orf16Q9NQ32 467 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 AGTPBP1Q9UPW5 1226 aa9.18□□□□□ -0.94
PTCHD3P1-201ENST00000612350 RLFQ13129 1914 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ANKRD18BA2A2Z9 1011 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 DDX58O95786 925 aaKnown RBP9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 DNAJB2P25686 324 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 HIBADHP31937 336 aaKnown RBP9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 GYG1P46976 350 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 GCLCP48506 637 aaPredicted RBP9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 MRE11P49959 708 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TMEM31Q5JXX7 168 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TREML2Q5T2D2 321 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 KSR2Q6VAB6 950 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 SCYL3Q8IZE3 742 aa9.17□□□□□ -0.94
PTCHD3P1-201ENST00000612350 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PI4KAP2A4QPH2 592 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 GPR37L1O60883 481 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 EPHB4P54760 987 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ADGRE1Q14246 886 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 HHIPL2Q6UWX4 724 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PI4KAP1Q8N8J0 262 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 USP6NLQ92738 828 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 DAGLAQ9Y4D2 1042 aa9.16□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ATRNL1Q5VV63 1379 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TRIM43BA6NCK2 446 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TRIM75PA6NK02 468 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PLIN1O60240 522 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ITGB8P26012 769 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 MAP3K10Q02779 954 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TCP10Q12799 353 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 NFIAQ12857 509 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 UBE4AQ14139 1066 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CCDC85BQ15834 202 aaPredicted RBP9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CCL14Q16627 93 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 SLC39A5Q6ZMH5 540 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 IL27Q8NEV9 243 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TRIM43Q96BQ3 446 aaPredicted RBP9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 RNPC3Q96LT9 517 aaKnown RBP9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 GAS2L1Q99501 681 aaPredicted RBP9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PICK1Q9NRD5 415 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 MORF4L1Q9UBU8 362 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ATP11BQ9Y2G3 1177 aa9.15□□□□□ -0.94
PTCHD3P1-201ENST00000612350 DNM1LO00429 736 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ELL2O00472 640 aaPredicted RBP9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 FOXO4P98177 505 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 NEXNQ0ZGT2 675 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 GCKRQ14397 625 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SNX17Q15036 470 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 FBXO33Q7Z6M2 555 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ZFPM1Q8IX07 1006 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TBC1D22AQ8WUA7 517 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TIFAQ96CG3 184 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PRDM12Q9H4Q4 367 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PRDM5Q9NQX1 630 aaPredicted RBP9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PDLIM7Q9NR12 457 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 FAM198AQ9UFP1 575 aa9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 IQSEC3Q9UPP2 1182 aaPredicted RBP9.14□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PEX10O60683 326 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ZNF853P0CG23 659 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SLURP2P0DP57 97 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CHAF1AQ13111 956 aaPredicted RBP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 IFIT5Q13325 482 aaKnown RBP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 NEUROD2Q15784 382 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TRIM60Q495X7 471 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CDC42EP5Q6NZY7 148 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SOCS4Q8WXH5 440 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 LPAR1Q92633 364 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ASCC2Q9H1I8 757 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms