RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PKN2Q16513 984 aaKnown RBP14.92□□□□□ -0.02
CBWD3-208ENST00000612050 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 FOXP4Q8IVH2 680 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-208ENST00000612050 GCC1Q96CN9 775 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 HAUS7Q99871 368 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 FLT1P17948 1338 aa14.91□□□□□ -0.02
CBWD3-208ENST00000612050 FOCADQ5VW36 1801 aa14.91□□□□□ -0.02
CBWD3-208ENST00000612050 IGF2BP3O00425 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
CBWD3-208ENST00000612050 IRF6O14896 467 aa14.91□□□□□ -0.02
CBWD3-208ENST00000612050 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-208ENST00000612050 DOCK1Q14185 1865 aa14.91□□□□□ -0.02
CBWD3-208ENST00000612050 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
CBWD3-208ENST00000612050 ZNF296Q8WUU4 475 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-208ENST00000612050 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
CBWD3-208ENST00000612050 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
CBWD3-208ENST00000612050 CXCL11O14625 94 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 PDE6AP16499 860 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 MAP3K10Q02779 954 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 KIF22Q14807 665 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 SH3BP5LQ7L8J4 393 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
CBWD3-208ENST00000612050 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 BRI3BPQ8WY22 251 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
CBWD3-208ENST00000612050 ZNF532Q9HCE3 1301 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
CBWD3-208ENST00000612050 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
CBWD3-208ENST00000612050 CRHR2Q13324 411 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 MCOLN1Q9GZU1 580 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 RWDD1Q9H446 243 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-208ENST00000612050 GINM1Q9NU53 330 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
CBWD3-208ENST00000612050 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 CDK5RAP2Q96SN8 1893 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 MYH1P12882 1939 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
CBWD3-208ENST00000612050 MYH7P12883 1935 aa14.88□□□□□ -0.03
CBWD3-208ENST00000612050 PHF20L1A8MW92 1017 aa14.88□□□□□ -0.03
CBWD3-208ENST00000612050 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
CBWD3-208ENST00000612050 ASNSP08243 561 aa14.88□□□□□ -0.03
CBWD3-208ENST00000612050 PTPRAP18433 802 aa14.88□□□□□ -0.03
CBWD3-208ENST00000612050 PALD1Q9ULE6 856 aa14.88□□□□□ -0.03
CBWD3-208ENST00000612050 KCNH4Q9UQ05 1017 aa14.88□□□□□ -0.03
CBWD3-208ENST00000612050 CAP2P40123 477 aa14.87□□□□□ -0.03
CBWD3-208ENST00000612050 SP3Q02447 781 aa14.87□□□□□ -0.03
CBWD3-208ENST00000612050 HDAC1Q13547 482 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-208ENST00000612050 ANKRD45Q5TZF3 282 aa14.87□□□□□ -0.03
CBWD3-208ENST00000612050 GADL1Q6ZQY3 521 aa14.87□□□□□ -0.03
CBWD3-208ENST00000612050 ANKRD23Q86SG2 305 aa14.87□□□□□ -0.03
CBWD3-208ENST00000612050 PARK7Q99497 189 aaKnown RBP14.87□□□□□ -0.03
CBWD3-208ENST00000612050 ATAD5Q96QE3 1844 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 FAM196BA6NMK8 535 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 USP17L5A8MUK1 530 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 GLRX3O76003 335 aaKnown RBP14.86□□□□□ -0.03
CBWD3-208ENST00000612050 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-208ENST00000612050 ADD2P35612 726 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.03
CBWD3-208ENST00000612050 UBE3CQ15386 1083 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 PTPN18Q99952 460 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 NAV1Q8NEY1 1877 aa14.86□□□□□ -0.03
CBWD3-208ENST00000612050 TRIM75PA6NK02 468 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 PDHXO00330 501 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 EHD4Q9H223 541 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 CABP5Q9NP86 173 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 MCM9Q9NXL9 1143 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
CBWD3-208ENST00000612050 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
CBWD3-208ENST00000612050 TLR2O60603 784 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 MX1P20591 662 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 SLC4A8Q2Y0W8 1093 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 ZNF280CQ8ND82 737 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
CBWD3-208ENST00000612050 RIOK1Q9BRS2 568 aaKnown RBP14.84□□□□□ -0.03
CBWD3-208ENST00000612050 ATP8A2Q9NTI2 1148 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 TMOD4Q9NZQ9 345 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 TRIM17Q9Y577 477 aa14.84□□□□□ -0.03
CBWD3-208ENST00000612050 A0A0G2JLL6 359 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-208ENST00000612050 MBD4O95243 580 aa14.83□□□□□ -0.03
CBWD3-208ENST00000612050 FBXO46Q6PJ61 603 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-208ENST00000612050 PRRT2Q7Z6L0 340 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-208ENST00000612050 SMCR8Q8TEV9 937 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-208ENST00000612050 EFCC1Q9HA90 598 aa14.83□□□□□ -0.03
CBWD3-208ENST00000612050 SLC45A1Q9Y2W3 748 aa14.83□□□□□ -0.03
CBWD3-208ENST00000612050 TCRBV5S4A2TA0A5A2 114 aa14.83□□□□□ -0.04
CBWD3-208ENST00000612050 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
CBWD3-208ENST00000612050 SPP2Q13103 211 aa14.83□□□□□ -0.04
CBWD3-208ENST00000612050 LCORLQ8N3X6 602 aa14.83□□□□□ -0.04
CBWD3-208ENST00000612050 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.04
CBWD3-208ENST00000612050 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
CBWD3-208ENST00000612050 ARMT1Q9H993 441 aa14.83□□□□□ -0.04
CBWD3-208ENST00000612050 GNRH1P01148 92 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms