RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 AKNAD1Q5T1N1 836 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 SH3BP5LQ7L8J4 393 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 APOBEC3FQ8IUX4 373 aaKnown RBP18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 IL27Q8NEV9 243 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 VEZTQ9HBM0 779 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 MYH1P12882 1939 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 ROBO3Q96MS0 1386 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 SLC3A2P08195 630 aaKnown RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 NT5C2P49902 561 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 GABPAQ06546 454 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 TCP10Q12799 353 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 STOX1Q6ZVD7 989 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 PNMA8AQ86V59 439 aaPredicted RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 METTL16Q86W50 562 aaKnown RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 TBC1D10CQ8IV04 446 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 FOXP4Q8IVH2 680 aaPredicted RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 EHD4Q9H223 541 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 RNF41Q9H4P4 317 aaPredicted RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 PI4KBQ9UBF8 816 aa18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 ASTN2O75129 1339 aaPredicted RBP18.94■□□□□ 0.62
CLTCL1-207ENST00000611723 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 DDTLA6NHG4 134 aaPredicted RBP18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 SMIM22K7EJ46 135 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 HLA-DOAP06340 250 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 PSMA5P28066 241 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 CTDSPL2Q05D32 466 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 ADCK5Q3MIX3 580 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 ANGEL2Q5VTE6 544 aaKnown RBP18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 TACC3Q9Y6A5 838 aa18.93■□□□□ 0.62
CLTCL1-207ENST00000611723 ORC4O43929 436 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 EVX2Q03828 476 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 RASA3Q14644 834 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 RABEP1Q15276 862 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 MFSD6Q6ZSS7 791 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 C16orf86Q6ZW13 317 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 NEK1Q96PY6 1258 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 PPP2R3BQ9Y5P8 575 aa18.92■□□□□ 0.62
CLTCL1-207ENST00000611723 HMGB1P09429 215 aaKnown RBP18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 MAP3K10Q02779 954 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 PDE4BQ07343 736 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 NCOA7Q8NI08 942 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 TEPSINQ96N21 525 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 DEFB129Q9H1M3 183 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 CNNM2Q9H8M5 875 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 GGA3Q9NZ52 723 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 SWAP70Q9UH65 585 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 PASKQ96RG2 1323 aa18.91■□□□□ 0.62
CLTCL1-207ENST00000611723 TBC1D12O60347 775 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 VEGFBP49765 207 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 TRDNQ13061 729 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 ZSCAN29Q8IWY8 852 aaPredicted RBP18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 JAKMIP1Q96N16 626 aaKnown RBP18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 KRT23Q9C075 422 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 TMEM39BQ9GZU3 492 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 ZNF287Q9HBT7 754 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 SERPINB13Q9UIV8 391 aa18.9■□□□□ 0.62
CLTCL1-207ENST00000611723 LAMB1P07942 1786 aa18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 CDK8P49336 464 aa18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 DHX32Q7L7V1 743 aaKnown RBP18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 DCPSQ96C86 337 aaKnown RBP18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 DYNLL2Q96FJ2 89 aa18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 POLR2AP24928 1970 aaKnown RBP18.89■□□□□ 0.61
CLTCL1-207ENST00000611723 CASTP20810 708 aaKnown RBP18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 SLC4A8Q2Y0W8 1093 aa18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 RUFY3Q7L099 469 aa18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 CSRNP1Q96S65 589 aa18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 ALDH8A1Q9H2A2 487 aaPredicted RBP18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 PRDM10Q9NQV6 1147 aa18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 HERC5Q9UII4 1024 aaKnown RBP18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 CYP46A1Q9Y6A2 500 aa18.88■□□□□ 0.61
CLTCL1-207ENST00000611723 ITGBL1O95965 494 aaPredicted RBP18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 RPS6KB1P23443 525 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 NEDD4P46934 1319 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 LBX1P52954 281 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 TATDN1Q6P1N9 297 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 RALYLQ86SE5 291 aaKnown RBP18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 FBXL16Q8N461 479 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 WDR19Q8NEZ3 1342 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 ESR2Q92731 530 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 MTA3Q9BTC8 594 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 MKNK2Q9HBH9 465 aa18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
CLTCL1-207ENST00000611723 B4E1Z4 1266 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 MCM5P33992 734 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 SHMT1P34896 483 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 COL9A3Q14050 684 aaPredicted RBP18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 EAPPQ56P03 285 aaPredicted RBP18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 LDHDQ86WU2 507 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 SULF1Q8IWU6 871 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 ZNF444Q8N0Y2 327 aaPredicted RBP18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 STK11IPQ8N1F8 1099 aa18.86■□□□□ 0.61
CLTCL1-207ENST00000611723 SLC44A5Q8NCS7 719 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms